Pedobacter aquae: FYC62_09705
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Entry
FYC62_09705 CDS
T06312
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pej
Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pej02000
]
FYC62_09705
Transporters [BR:
pej02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FYC62_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_19
TPR_6
TPR_16
ANAPC3
TPR_14
TPR_2
Motif
Other DBs
NCBI-ProteinID:
QEK51890
UniProt:
A0A5C0VL37
LinkDB
All DBs
Position
complement(2221317..2222741)
Genome browser
AA seq
474 aa
AA seq
DB search
MKNKILAFALVVMALLPSCEKYTDITPTGAVILNSTQDYYRLVSFPNRAYVTLNFQYLVD
DQWMKESNVIGLNKNINIINFTFDEQTDRVSLLSSSNLYDRAYFYINRWNTIISGIEFTD
GEQRIKDLAKAEAKILRAFDHFILVNVYAKAYDPATAATDGGICIMDKYDLEAKPKKSTV
EEVYRFIQKDIDEALPFLQENPAGPYHPNVAFGYALKAKVHLFKREIAQAKEAALKSLSY
KDEIFDLVDYSRRGGPTSVPVIAPNNPEILSYMYMTGYNEMNFGFNYVISPELRNLFGNN
DARFNLFFVNNTASFVDLGTGAAYYNIRFNQFFYGTVGLKTTEVHLMLAECYARENNFTD
AIAILNKLRAKRILSGTVNLDVPATRQATMELIVNERRKELLFGFHRFFDLKRLNNEPDY
AKTLTRTYPLVSTAVPRQTYTLAPNSRLYIIPFPLNAMKLNPNLRLNTDEKLPF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaatattagcgtttgcattggttgtaatggctttacttccatcatgcgaa
aaatatacagatattaccccaacaggtgctgtcatcttaaattcaactcaagattattac
aggttggtgtcttttccaaatagagcatatgtaactttaaacttccaatacttggtagat
gaccaatggatgaaagagtctaatgttattggactaaacaaaaatatcaatatcatcaac
tttacttttgacgaacagacagatagagtttctttattaagttcgtctaacttatacgat
agagcttacttctacatcaatagatggaataccataatttctggtattgaatttaccgat
ggcgaacagcgtattaaagatttagctaaagctgaggctaaaattttaagagcctttgat
catttcatcttggtaaacgtatatgccaaagcttatgaccctgcaacagctgctacagat
ggtggtatttgtattatggataagtacgatttggaagcaaagcctaaaaaatctacagta
gaagaggtttataggtttatccagaaagatattgatgaagcgcttcctttcttacaagaa
aatccagctgggccatatcatccaaatgttgctttcggatatgctttaaaagctaaagta
cacttattcaaaagagaaattgcacaagctaaagaagctgctttaaaatctttatcttat
aaagatgagatttttgatttggttgattattcaagaagaggcgggccaacttctgtacct
gtaatagcaccaaataatccagaaattttaagttatatgtacatgacaggttataacgaa
atgaattttggatttaattatgtaatcagtcctgagttaagaaacctttttggaaacaat
gatgctaggtttaaccttttctttgttaacaacaccgctagttttgtagatttaggtaca
ggggcggcttattataacatcaggtttaaccaatttttctacggtacggtaggcttaaaa
acaaccgaggtacatttgatgttagcagaatgttatgctcgtgaaaataatttcactgat
gctattgctatccttaataaattaagagctaaaagaatactttcaggaactgttaattta
gatgttccggcaaccaggcaagcaactatggaattaattgtaaacgaaagacgtaaagaa
ctactttttggttttcatcgtttctttgatttaaagcgcttaaacaatgagccagactat
gctaaaactttaaccagaacatatccgcttgtaagcacagcagtgcctaggcaaacctat
actttagcgccaaattcaagattatatatcattccatttccgttaaatgcgatgaaactt
aatccaaatttaagacttaacaccgacgagaaattaccattttaa
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