Pedobacter aquae: FYC62_11085
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Entry
FYC62_11085 CDS
T06312
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pej
Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pej03400
]
FYC62_11085
Enzymes [BR:
pej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
FYC62_11085
DNA repair and recombination proteins [BR:
pej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
FYC62_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
zf-CCCH_6
SMRP1
Motif
Other DBs
NCBI-ProteinID:
QEK52124
UniProt:
A0A5C0VMA9
LinkDB
All DBs
Position
complement(2511348..2512883)
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AA seq
511 aa
AA seq
DB search
MSKTLRLILGDQLNLQHPWFADKQKDVTYVMMEIMPEQLYVKHHIQKIIGFFLNMRHFAL
SLKQQGHHVIYFYLDSTENQQDFKENLLWLKQKLNIKKLEYQLPDELRLDETLKEIQKDF
KESKVYDTHHFLTSRNEVRDFFRGKKQYLMENFYRYMRKKHQILVDSQLNPIGGQWNFDA
ENRKKYDGKTSLKEPLLFKRDVTELVAVLDKMEVPYMGEINKKEFDYPVGRQEAFALLDY
FCEELLPAFGTYEDAMLKEHVTLFHSRLSFVLNLKIISPSEVVQQVIKYWELHQHSITIA
QVEGFTRQVIGWREYMRGIYWVEMPAFKEKNFFNYSGTLPQWFWDGKVKMNCLKHCISNS
LENAYAHHIQRLMVIGNFTLLAGIHPTEVDYWFLGTYADAVEWVQITNTRGMSQFADGGI
VGSKPYVSSANYIDKMSNYCKSCFYDKGKRHGSKACPFNSLYWNFYMEHEEKLKNNQRVA
MMYKLLEKIEPEEKEKITEQAKKYLESLNSL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaccttaaggttaattttaggagatcaactcaatttgcaacatccttggttt
gctgataagcaaaaggatgtcacttatgtgatgatggaaattatgccagaacaattatat
gtgaagcatcatatccaaaaaattattggcttcttccttaatatgaggcatttcgcctta
agccttaaacaacaagggcatcatgtcatttacttttatctggatagcacagaaaatcag
caagattttaaagaaaacctactttggcttaagcaaaagctcaatattaaaaagttagaa
taccaattaccagatgaattaagactagacgaaacgttaaaagaaattcaaaaagacttt
aaagaaagcaaagtttacgatacccaccacttcctaacttcaagaaatgaggtcagagat
ttttttaggggaaagaagcaatacctgatggaaaatttctaccgttatatgcgtaagaag
caccaaatattggtagatagccagctaaatcccataggaggccaatggaattttgatgcg
gagaataggaaaaaatatgatggcaaaacttcattaaaagaaccattacttttcaaaaga
gatgtaaccgagttggtggctgtactagacaaaatggaagttccctatatgggagaaatc
aacaaaaaggaatttgattatccggttggtaggcaggaagcttttgccctattagattat
ttttgcgaggaacttttgccagcttttggtacttatgaagatgctatgctaaaagagcat
gtaacacttttccactccagattatcttttgtactcaatttaaaaatcatcagccccagc
gaggttgtacaacaggttattaagtattgggagttgcaccaacatagtattactatagct
caagtagaaggttttacaagacaggttatagggtggcgagagtatatgagggggatatat
tgggtagaaatgcctgctttcaaagaaaaaaacttcttcaattattctggcacattaccg
caatggttttgggatggaaaagtaaaaatgaattgcctaaaacactgcatatctaattct
ttagaaaatgcttatgcccatcatatacagcgtttaatggtgattggaaatttcaccttg
ttggcaggtatacatccaactgaagttgattattggtttttaggtacttatgctgatgct
gttgaatgggttcaaattaccaataccagagggatgagccaatttgcagacggaggaatt
gtgggtagtaaaccttatgtatcatcagccaattatattgataagatgagtaattactgc
aaaagttgtttttacgataaggggaagagacatggtagtaaagcttgtccattcaatagc
ttgtattggaacttttatatggagcatgaagaaaagctaaaaaacaatcagcgagtagct
atgatgtataagcttttggaaaaaattgagcccgaagagaaagaaaaaatcacagaacaa
gcaaaaaaatatttggaaagtctaaacagcttgtaa
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