Pedobacter aquae: FYC62_11175
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Entry
FYC62_11175 CDS
T06312
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pej
Pedobacter aquae
Pathway
pej00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FYC62_11175 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pej01007
]
FYC62_11175 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pej03016
]
FYC62_11175 (serS)
Enzymes [BR:
pej01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FYC62_11175 (serS)
Amino acid related enzymes [BR:
pej01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FYC62_11175 (serS)
Transfer RNA biogenesis [BR:
pej03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FYC62_11175 (serS)
Prokaryotic type
FYC62_11175 (serS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
MglC_N
FapA
ERM_helical
CCDC192
Motif
Other DBs
NCBI-ProteinID:
QEK52137
UniProt:
A0A5C0VJ78
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All DBs
Position
complement(2526141..2527412)
Genome browser
AA seq
423 aa
AA seq
DB search
MLQVSYIRENKEQVLERLSVRNFSQPELVDEIISLDERRRSTQSKGDALQAEANAAAKQI
GELMKQGKKEEAEAFKAKTASSKEEIKKLHEELAVIEQELHLKLVQLPNLPHSSVPKGKT
PEENEVVLTYGEVPNLAENALPHWDLAAKYDLIDFELGVKITGAGFPVYKGKGAKLQRAL
INYFLAEADKAGYEEMMLPHLVNEASGFGTGQLPDKEGQMYHVGLDNLYLIPTAEVPITN
LYRDVILKEEQLPVKNCGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVQVVHPDKSYDV
LEQMSLHVQSLLQNLGLHYRVLRLCGGDMGFTSALTYDMEVWSAAQQRWLEVSSVSNFET
YQSNRLKLRFKGSEGKTQLAHTLNGSALALPRIVASILENYQTPEGIKIPDVLVPYTGFD
IIK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagttagttatatccgcgaaaataaagagcaggttctagaacgtttaagtgta
agaaattttagtcagccagaactggtagatgaaatcatcagtttagatgagagaagacgt
tctacgcaatccaaaggagacgctttgcaagcagaagcaaatgcagcagccaagcaaatt
ggcgagttgatgaagcaaggtaaaaaagaagaagctgaagcttttaaagcaaaaacggca
tcatccaaagaagaaataaaaaaattacatgaagagcttgcagttatagagcaagagctg
cacctaaaattggtacagttaccaaatttacctcattcatctgtgcctaaaggcaaaact
ccagaagaaaatgaagtggtattaacctatggtgaggtgccaaacttggcagaaaatgct
ttgccacattgggatttagccgcaaaatacgatttgattgattttgaattgggtgttaaa
attactggtgctggtttcccggtttataaaggcaaaggagctaaactacaaagagcacta
attaattattttttagccgaggctgataaagctggttacgaagaaatgatgttaccacat
ttggtaaatgaggcatcaggttttggtaccgggcaattaccagataaagaggggcagatg
tatcatgtaggcttagataacctatatttaatacctactgctgaagtgcctattactaat
ttatacagagatgttattttaaaagaagaacagttacctgttaaaaactgtggttataca
ccatgttttagaagagaagcgggttcttatggcgcacatgtaagaggtttaaatcgttta
caccaatttgataaggtagagattgttcaagtggtacatccagataaatcttatgatgtg
ctagaacaaatgagcttacatgtacaaagcttattacaaaatttaggcttacattatcgc
gttttaagattatgcggtggcgatatgggcttcacatcggccttaacttacgatatggaa
gtatggagtgctgcacaacagcgttggttagaggtttcttctgtttctaattttgagact
taccaaagcaatcgtttaaaattaagatttaaaggtagcgagggtaaaacacagttagca
catactttaaacggaagtgctttagctttaccaagaattgtagcttctattttagagaat
taccaaacgccagaaggaattaaaattcctgatgtattggttccttatacaggttttgat
atcattaaataa
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