Pedobacter aquae: FYC62_12290
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Entry
FYC62_12290 CDS
T06312
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pej
Pedobacter aquae
Pathway
pej00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FYC62_12290
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pej01007
]
FYC62_12290
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pej03016
]
FYC62_12290
Enzymes [BR:
pej01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
FYC62_12290
Amino acid related enzymes [BR:
pej01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FYC62_12290
Transfer RNA biogenesis [BR:
pej03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FYC62_12290
Prokaryotic type
FYC62_12290
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
DUF3242
Motif
Other DBs
NCBI-ProteinID:
QEK52340
UniProt:
A0A5C0VM82
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All DBs
Position
complement(2806481..2807863)
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AA seq
460 aa
AA seq
DB search
MASIKASIPKGTRDFGPVEMIRRNHIYDTIKSVFKKFGYQEIQTPTMENLDTLTGKYGDE
GDKLIFKILNSGDYMLKADGLKQKGEELSSKNLLPLISEKALRYDLTVPFARYVVMHQNE
IAFPFKRFQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEAEFICIYDEALSKLGLT
DFTIKINNRKILTGIAELIGKPSQIVDLTVAIDKLDKIGLEGVEKELLSKGFTAEDLQTL
KPVILLAGSNEEKLAQLDTILEASDSGLKGIAEIREVFDYLASFKLNKAKIELDLTLARG
LNYYTGCIFEVKTNEVAMGSIGGGGRYDDLTGMFGLQNLTGAGISFGADRIYDVLEELNL
FPHTTQESTKVLICVFGKEEEKYALPLLASLRAQNIHAELYPFGAKIKKQMQYANDKNIP
YVIVIGGDEMQSGKLTFKTMQSGTQEQLSVDEIMKKVMVS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattaaagcatccatcccaaaaggtacaagagattttggtccggtagaaatg
attcgtagaaaccatatttacgataccattaaaagcgttttcaaaaagtttggctaccaa
gaaatacaaacgccgacgatggaaaacttagatactttaaccggtaaatatggcgatgaa
ggcgataaattgattttcaaaatcttgaatagtggagattatatgcttaaagcggatggc
ttaaagcaaaaaggcgaagagttatcatctaaaaacttattaccactaatctcagaaaaa
gccttaagatatgatttaaccgtaccatttgccaggtacgtggtgatgcatcaaaacgaa
atagcttttccttttaaaagattccagatacagcccgtatggcgggcggatagaccacaa
aaagggcgttaccgcgagttttaccaatgtgatgccgatgtggttggctcaaactcttta
cttaatgaagccgagtttatttgcatttacgatgaagctttaagcaagctaggcttaaca
gatttcaccatcaaaatcaataaccgaaaaattttaaccggcattgcagaacttattggc
aaaccatcacaaattgttgatttaacagttgcgatagataaactagataaaattggctta
gaaggggtagaaaaagagcttctaagcaaaggctttacagccgaagatttgcaaacgctt
aaacctgtcatattattagctggctctaacgaagaaaaattagcgcaattagatactatt
ttagaagcatcagatagtggtttaaaaggtattgcagaaataagagaagtatttgattac
ctagctagttttaagctcaacaaagctaaaattgaactcgatttaacacttgcccgtggc
ttaaattattacacaggctgtatttttgaagttaaaaccaacgaagttgctatgggttct
attggtggcggcggcaggtatgatgaccttaccgggatgtttggtttacaaaacctcact
ggtgctggtatttcttttggtgccgatagaatttatgacgttttagaagagttaaacctt
ttccctcatactacacaagaaagcaccaaagttttgatatgtgtttttggtaaagaagaa
gaaaaatacgctttaccgctcctggcgtcattaagagcacaaaatattcatgcagagctt
tacccatttggagctaaaattaaaaagcaaatgcaatatgctaatgacaaaaacattccc
tatgttattgttattggtggcgatgaaatgcaaagcggaaaattgactttcaaaaccatg
caaagcggcacccaagagcagttaagcgttgatgaaataatgaaaaaagtgatggtttct
taa
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