KEGG   Pedobacter aquae: FYC62_12675
Entry
FYC62_12675       CDS       T06312                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pej  Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:pej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pej03400]
    FYC62_12675
Enzymes [BR:pej01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FYC62_12675
    5.6.2.6  RNA 3'-5' helicase
     FYC62_12675
DNA repair and recombination proteins [BR:pej03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FYC62_12675
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QEK52411
UniProt: A0A5C0VL69
LinkDB
Position
2881616..2884126
AA seq 836 aa
MSPGEKIISNWYKQKKWQQFAFQQEMMDAYLKGYSGLLNAPTGSGKTFALFLPFLADYIN
QYPNDYQSRKNNGLLMLWITPLRALTNDIQKAMQTVVDDLGIPWKIAARTGDTSSADKQA
IKRKPPEVLLTTPESLHLMLAQKDYPKTFEKINVVVTDEWHELLGTKRGVQMELGLSRLK
GLMSRDARPKTDDKPGFPTSHFGHQTLKIWGISATIGNLEEAAQVLLGVNFPKEQQKMVK
ADIDKNLVITSIIPQNIENYSWSGHIGLKLLPEVMEIVAQSKTTLIFTNTRAQSEIWYQA
ILDKYPEYAGIMAMHHGSLDNDLRNWVEQALHAEILKVVVCTSSLDLGVDFRPVDTIIQI
GSPKGVARFMQRAGRSGHHPGATSKAWFVPTHSLELLEGAALKHAIKQKTFESRDPIILA
FDVLIQYLVTLAVSDGFRADEIYKEVKSTFAYADILPQEFDDLLDFISKGGKTLSQYDEY
LKVEYENGLYKVNNRRIAMRHRLSMGTITSEISMRVKFQSGGSLGTVEEGFIAKLKIGDN
FWFAGRNLELVRVKDMTAYVKKSTKKKGAIATWLGGRMPLSSQLSAVFREKLDEVALGVE
EDEEIIALRPLFTQQNSLSHLPQKTEFLIEKLETRDGHHLFFYPFEGRLVHEGMASLLGF
RLSKLKNASFSIAMNDYGFELLTDDEVLLEKALENNLFSDKNLIDDIQNSLNANEMARRR
FRDIAHISGLIFTGFPGKPMKNKHLQSSTSLLFDVFSEYEKDNLLIRQAYNEALAFQLEE
FRLREALQRIQKQKIVLKEMAQPSPFAFPIMVDRLREKMSTESLEERVAKMVERLN
NT seq 2511 nt   +upstreamnt  +downstreamnt
atgagcccgggagaaaaaatcataagcaattggtataagcaaaaaaagtggcagcaattt
gcttttcaacaagaaatgatggatgcctatttaaaaggctattctggcttgttaaatgct
ccaacaggtagtggtaaaacttttgccttgtttttgccttttttggcagattatatcaat
caatatccaaacgattaccaaagcagaaaaaataatggtttgttaatgttatggataaca
ccattgagagccttaacgaatgatatccaaaaggccatgcaaactgtggttgatgatttg
ggaatcccttggaaaattgccgcccgcactggcgataccagtagtgccgataagcaagcc
atcaaaaggaaaccaccagaagttttattaaccacaccagagagcttacacctcatgctg
gctcaaaaagattatcccaaaacttttgaaaaaataaatgtggttgtaaccgatgaatgg
catgaactcttaggcacaaaacgcggtgtacaaatggagttaggtttaagtaggttgaaa
ggattgatgtcgagagacgcaagaccgaagaccgatgataagcccggctttccaacttct
cacttcggtcatcaaactttaaaaatttggggtataagcgccactattggtaatcttgaa
gaagctgcacaagtgcttttaggcgttaacttccctaaagagcagcaaaaaatggtgaaa
gctgacattgataaaaatctcgttatcacttctatcatccctcaaaacatagaaaattat
agttggagcgggcatattggcttaaagctgcttcccgaggtgatggagatcgtagcccaa
agcaaaaccacactcattttcaccaataccagagcgcaatcagaaatatggtatcaggct
atattagataaatatccggagtatgctggtatcatggccatgcaccatggttctttagat
aacgatttacgcaattgggtagagcaagctttacatgccgagattttaaaagtagtggtg
tgtacttccagtttagatttgggtgtagattttagacccgttgataccattatacaaatt
ggtagccctaaaggagtagcccgttttatgcaaagagcaggcagaagtgggcatcatcca
ggtgcaacttccaaagcttggtttgtgcccacgcattctttagaattattagaaggcgct
gcacttaaacatgccatcaaacaaaaaacttttgagagcagagaccccattattttagct
tttgatgttcttatccaatacttggttactctggctgtttctgatggctttagagccgat
gaaatttataaagaagtaaaaagcactttcgcttacgctgatattttacctcaggaattt
gatgatttgctagattttatcagcaaaggaggtaaaacactctcccagtacgatgagtat
ttaaaagtagaatacgaaaacggtttgtataaagtaaacaaccgtagaatagccatgcga
catcgtttaagtatgggaaccatcaccagcgaaataagcatgcgggtaaaatttcaaagc
ggcggcagtttaggcactgttgaagaaggctttattgctaaacttaaaataggcgataat
ttttggtttgcaggcagaaacttagaattggtgcgtgtaaaagacatgacagcctatgtt
aaaaaatcaactaaaaagaagggagctatagctacttggctagggggtagaatgccatta
tcgtcgcaactatcagctgtttttagagagaaacttgatgaggtagccttaggtgtagaa
gaagacgaagaaattattgctttacgtccgctttttacccaacaaaactctttatcacat
ttgcctcaaaaaaccgagtttcttattgaaaaattagaaacccgagatggacaccattta
ttcttttacccttttgaaggcaggttggtacatgaaggtatggcatctttattaggtttt
agattatcaaaacttaaaaatgctagcttttctatagccatgaatgattatggttttgag
ttattaaccgatgatgaagtactactagaaaaagccttggaaaacaatttatttagcgat
aaaaatttaatagacgatatacaaaacagcctcaatgcaaatgaaatggcccgcagaaga
tttagagatattgcacatatttctggtttaatttttacgggtttcccgggcaagcctatg
aaaaacaaacatctgcaatcttcaacatccttattgtttgatgtatttagcgaatacgaa
aaggataatttattaattaggcaagcttataacgaggctttagctttccaactagaagag
tttaggttaagagaagctttacagcggatacaaaaacaaaaaattgtgcttaaagaaatg
gcacaacctagtccttttgctttccctattatggtagataggctgagagaaaaaatgagt
accgagtctttagaagaaagagtggctaaaatggtagaaagattaaattaa

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