Pedobacter aquae: FYC62_13330
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Entry
FYC62_13330 CDS
T06312
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pej
Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pej03400
]
FYC62_13330 (radA)
DNA repair and recombination proteins [BR:
pej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FYC62_13330 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Rubredoxin_2
ATPase
ChlI
DnaB_C
Lon_C
AAA
AAA_22
AAA_16
AAA_14
nSTAND3
AAA_24
NACHT
AAA_5
NTPase_1
Elong_Iki1
Mg_chelatase
Rad51
GvpD_P-loop
AAA_29
DZR
HypA
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
QEK52526
UniProt:
A0A5C0VJ36
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All DBs
Position
3041925..3043307
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AA seq
460 aa
AA seq
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MAKTKSSYFCQSCGYESAKWLGKCPSCQQWNTFVEEVVEKKSSGVPDWKSAGTASHSRVN
KPSKVQEIVYTEEHRLVTPDKELNRVLGGGIVGGSLVLIGGEPGIGKSTLMLQLALIVPK
LKVLYVSGEESEQQIKLRAERILAKPVSDCYILTETSTQNIFKQIELLEPNLVIIDSIQT
LHSSHIESTPGSVSQVRECTAELLRFAKESSTPVFLIGHITKDGMIAGPKILEHMVDTVL
QFEGDRHHVYRILRAIKNRFGSASELGIYEMEGTGLREVSNPSEILLSQREEPLSGVTIS
ATMEGMRPMLIETQALVSTSPYGTPQRSATGFDTRRMNMLLAVLEKRCGFKLGAKDVFLN
IAGGIRVEDPSIDLGLVAAIISSHEDIPVSYKICFAAEVGLSGEIRAVTRIEQRIAEAQK
LGFEQIFISKYNKKGLDISKFKIEIKTVAKVEEMFSLLFG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaactaaatcttcttatttctgtcagagttgcggatacgaatctgctaaatgg
ttaggtaaatgcccttcatgccagcaatggaacacttttgttgaagaagtggtagagaaa
aaatctagcggcgtacccgattggaaaagtgctggaactgcatcacacagcagggtaaac
aagccatcaaaagttcaagaaattgtatatacagaagaacaccgtttggttacaccagat
aaagaactaaaccgtgtgcttggtggtggtattgttggtggttcattggtattgataggt
ggcgagccgggcataggtaaatctaccttgatgttgcaattggcccttattgtgcctaaa
ctaaaagtactttatgtatctggcgaggagagcgagcagcaaatcaagctcagggcagag
cgtatattagctaaaccggtgtcagactgttatatcctcacagaaacatcaacacaaaat
atatttaagcaaatagagcttcttgagcctaatttggtgattatcgattctattcaaacc
ttacattcatcacatatagaatctactccgggaagtgtttcgcaggtgagagaatgtacg
gcagaacttttacgttttgctaaagaatcatcaacacctgtatttttaattgggcatatt
accaaagatggaatgatagccggaccaaaaatattagaacacatggtagataccgttctg
cagtttgaaggagatagacatcacgtttacagaatattaagagctattaaaaacagattt
ggctcggcatcagaactaggtatttatgaaatggaaggaacagggcttagagaagtttct
aatccttcagaaatactgttatcgcaaagggaagagcctttaagtggcgttaccatatcg
gccactatggaaggcatgcgccctatgctgatagaaacccaggcattggtaagtacatcg
ccttacggtacaccacaacgttccgcaacaggttttgatacccgccgtatgaacatgctt
ttagccgttttagagaaaagatgcggatttaagttaggtgcaaaagatgttttcttgaat
atagcgggcggtataagggtagaagatcctagtatagatttaggcttggtagcagcaata
atttcttcgcatgaggatattccggtttcttataaaatttgttttgctgccgaggtaggt
ttatctggagagattagagccgttacccggatagagcaacgtattgcagaagcccagaag
ctgggtttcgagcaaattttcatctctaagtacaacaaaaaaggtctagatatcagtaag
tttaaaatcgagattaaaaccgtagccaaagtagaagaaatgtttagcttgttgtttgga
tag
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