Pedobacter sp. KBS0701: FFJ24_000685
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Entry
FFJ24_000685 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_000685
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_000685
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DUF5016
Motif
Other DBs
NCBI-ProteinID:
QDW23423
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All DBs
Position
174321..175850
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AA seq
509 aa
AA seq
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MRKNIYIVLALAVVVGLGACKKDFLDQKNPNAVAPENYFKTENDVLLAVNGAYQSLRSSN
TMGENSGLFTDERSDDAGRNDNQSNAGEPFQFNDFSLLPSNSYLKAHWLALYNAITRTNF
ILSNIDKANFTTQANKANYAAEAKFIRAIMYFELVRKWGAVPLVTKQLSTNEEVTPFVFR
APEADVYNQIVADLKDGLNSTLPNFPATANIGRTSKAAINAYLGKVYLTMAATLPNNKAE
NLSNANTYLLAAYNMKAFGNLSEIPYTDVFDVTKKTTCKELIFQISYKQGDINYSSSIAA
NNQAKGETINSLKVSTGIGGNVKLDLINEYESSDLRKDFSVKFANDATVKDWFITKFRDA
SELATKNGYGGNDWILMRYADVILMLAEVNMLQGNDAVAIQYLDMVRARAGMPLYAVTKT
DATYAAKFPTLKLAILHERRVEFAFEHQRWFDLIRNFTAAELVTYLKAKPQSAYGIAKLA
NVTTKDRYYPIPFDEVKLDPVKMYQNPGY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaatatttatatcgttttagccctggctgttgtggttggccttggtgcttgt
aaaaaggattttctggatcaaaagaatccaaatgctgtagcgcctgaaaattattttaaa
acagaaaatgatgttttactggccgtaaatggtgcttatcaatcgttgagaagcagtaac
actatgggtgagaacagtggtttatttaccgatgaacgctctgacgatgccggaagaaat
gataaccagagtaatgcgggtgaaccttttcagtttaacgatttttccctgctgccaagt
aactcctatctgaaagcccattggttagccctttacaatgcgataaccagaactaatttt
attttatccaacattgataaagcgaattttaccactcaggctaataaggcaaattacgct
gcagaagctaaattcataagggccattatgtatttcgaactggtacggaagtggggcgcg
gtaccgttggtaacaaaacaattatcaactaatgaagaggtgacaccctttgttttccgc
gcacctgaagcggatgtttacaatcaaattgtagccgatttaaaagatgggttaaacagt
acgttacccaactttccggcaacagcgaatatcggaagaacatctaaagccgccattaat
gcctatctgggtaaggtttatttaaccatggcagccactctgccaaacaataaggccgaa
aacctaagcaatgcaaacacttacctgttggcagcctacaatatgaaagcttttggtaac
ctttctgaaattccctatactgatgttttcgacgtaacgaaaaaaacgacctgtaaagaa
ttgattttccagatttcttacaaacagggtgatattaattatagctcaagcatcgccgcc
aacaaccaggcgaaaggcgaaaccattaattcgttaaaggtttctaccggtatcggtggt
aatgtgaagctagaccttattaacgaatatgaatcaagtgatttaaggaaagatttttct
gtaaagtttgcaaatgatgctacggtaaaagattggtttattaccaaattccgtgatgcg
agtgaattggctacgaaaaacggttatggaggcaacgactggattttaatgcgttatgct
gatgtaattttaatgcttgcggaagttaatatgttgcagggcaatgatgctgtggctatt
cagtatttagatatggttagggcaagagcgggtatgccactttatgcagtaactaaaacg
gatgccacttatgccgctaaattcccgactttaaaactggctattttacacgagcgtagg
gtagagtttgctttcgaacaccaaagatggtttgatttaatcaggaattttactgctgca
gagttggttacttacctaaaagcgaaaccacagtcggcgtatggaattgctaagctggct
aacgtaaccacaaaagacaggtattatcctattccttttgatgaggtgaaattagatccg
gttaaaatgtatcagaatccgggttactaa
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