Pedobacter sp. KBS0701: FFJ24_000945
Help
Entry
FFJ24_000945 CDS
T06361
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00520
Amino sugar and nucleotide sugar metabolism
pek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
FFJ24_000945
Enzymes [BR:
pek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
FFJ24_000945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
QDW23470
LinkDB
All DBs
Position
complement(257637..259301)
Genome browser
AA seq
554 aa
AA seq
DB search
MKKILYLFLLCLTSQAFAQIKFTNPILAGFYPDPSITKVGTDYYLVNSTFSYFPGIPVFH
SKDLKNWKQIGNVIERNTQMTFLGDGTSRGLFAPSINYYKGTFYMTCTNIDKGGNFVMTA
KNPAGPWSDPVWLREVKGIDPSLFFDKDKAYIVYNSDAPDNKPLYSGHRTIRTYEFDPAT
LKVSGEEHLLVNGGVDISKKPVWIEGPHIFKREDWYYICAAEGGTSVNHSQVILRSRSAT
GPYVPYENNPILTQRDLDPNRPNPITSTGHAELVEGPDGKTYAIFLAVRPYEGNFYNTGR
ETFIAPVKWTNGWPVINPDFKEVQYHYAADYKEIKQAGAPPQNGNFSYRTTFDNKLDQSL
LFLRKKDSSWYSLSKKNGFTMKLKPETCMEKTNPAFLGKRQQHTFCTASTALQFTPKSEN
EKAGLMIFQGEFNFYFMCKSIKENKTVIQLFKGDKKAGNMVLITELPLSNPSAAIQLEIE
AKGGLYDFKYKQGNEGWLTLKNDVDGKYLSTQAAGGFIGSLFALYATSSGQQSDNTASFK
WLDYSGNDKIYHSK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcctttatttattcttgctatgcctcacctctcaagcatttgcacaaata
aaatttacaaatccaattcttgcaggtttttatccagatccaagtatcactaaagtaggt
actgactattacctggttaattctactttttcctattttccgggcatccctgtctttcac
agcaaggatttaaaaaactggaaacagattggaaatgtaattgagcgaaatacgcagatg
acttttctgggagatggaacctcacgtggtttattcgcaccttctattaattattataag
ggaaccttttatatgacttgtaccaatatagacaagggtggaaattttgtcatgactgct
aaaaatcctgcaggcccatggagcgaccctgtatggcttcgcgaagtaaaaggaatcgat
ccatctttatttttcgataaggataaagcctatatcgtttacaatagtgatgccccggac
aataaaccactttacagtggccaccgtaccatccggacgtatgaattcgaccctgcaaca
ctcaaagttagcggagaagaacatttgcttgtaaatggcggagtggatatttctaaaaaa
ccagtatggattgagggaccgcacatttttaaacgcgaagattggtattatatatgtgct
gctgagggtggaacaagtgtaaatcattcccaggttatccttagaagccggtcagctacg
ggcccttatgttccttatgaaaacaatccaatcctaacccaacgggatctggatccaaac
cgtccgaatccgataacctcaactggtcacgcagaactggtggaaggacctgatggaaaa
acttacgctatttttcttgccgtgcgtccatacgaaggaaatttttataacaccggaaga
gaaacatttattgctccggttaaatggacaaatggatggcctgtaataaatcctgatttt
aaggaagttcaatatcattatgcagcggattacaaggaaatcaagcaagcaggcgcgcca
ccacaaaacgggaacttttcgtacaggactacatttgataacaaactagaccaatcttta
cttttcttaaggaaaaaagacagttcatggtatagcttaagcaagaaaaatgggttcacg
atgaaacttaagcctgaaacctgtatggagaaaaccaatccggcatttcttggaaaacgt
cagcagcatacattctgtacagccagcacagcacttcaattcaccccgaaatccgaaaat
gagaaagcagggttaatgattttccagggagaatttaatttttactttatgtgcaaatcc
atcaaagaaaacaaaacagttattcagctttttaaaggtgataaaaaggccggaaatatg
gtattgattactgaattaccactttcaaatccatcggcagcgatacagctggaaattgaa
gctaagggaggtttatacgattttaaatataaacaagggaacgaaggctggcttacttta
aaaaacgatgttgacggtaaatatttaagcacacaggctgcaggcggatttatcggatcg
ctgttcgcattgtacgcaacgtcttccggccagcagagcgataatacagctagttttaag
tggctggattatagtggtaatgataaaatctatcactcaaaataa
DBGET
integrated database retrieval system
