Pedobacter sp. KBS0701: FFJ24_001155
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Entry
FFJ24_001155 CDS
T06361
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pek02022
]
FFJ24_001155
Two-component system [BR:
pek02022
]
NtrC family
Unclassified
FFJ24_001155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
MCM
AAA_2
AAA_19
Mg_chelatase
TIP49
AAA_7
nSTAND3
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
QDW23507
LinkDB
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Position
complement(335753..337090)
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AA seq
445 aa
AA seq
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MNGMVLIIDDEKKICSLLSRIIELEGFKTLQANTGKEGLKLLKSNDVSIVISDVKLPDVN
GVALVKDIKTIKPYVEIINLTAYGTIADGVLAIKNGAFDYLVKGDDNEKIIPLLYKAMDK
SNLQRRVSDLENKITRKHSFDTIIGQSKTLKEAIDLAKKVSTTDTTVLLLGETGTGKEVF
AQSIHYESLRSAKPFVALNCSGFSPDLLESELFGYKAGAFTGANKDKKGLLEEANGGTLL
LDEIGEMNLDLQAKLLRVLESQTFIKVGDTQTQQVNVRILAATNKDLKADALSGKFRSDL
YYRLSVFTITLPPLRERKADIPALAIHYLKEFANKVNRSAPKMDDKILSILSVHSWKGNI
RELKNVIERLVILSDGDVLSTAALPPEFFEFIPIENDYNLQQIEKQHIQKVLIHTKGNKT
ETSRLLGIGLTTLYRKIEEYQIREV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggatggtcctcatcattgatgatgaaaagaaaatttgcagtttactttccagg
attatagagctcgaaggttttaaaaccttacaggccaataccggaaaagaagggctaaag
cttttaaaaagtaatgacgttagcattgtcatcagtgatgtaaagcttcccgatgtaaat
ggtgttgcgctggttaaagatatcaaaaccataaaaccctacgtagaaattattaacctt
accgcttatggtaccattgccgatggtgttttggctatcaaaaatggggcatttgattat
ctcgtaaaaggcgacgataacgagaaaattattccgcttttatacaaagcgatggataaa
tcaaatctgcagcgcagggtttccgatctcgaaaacaaaatcacgaggaaacatagcttc
gatacaattatcggtcagtcaaaaacattaaaggaagccattgatctggcaaaaaaagta
agcacaacagatactaccgttttattgctcggtgaaaccggaacaggaaaagaagttttt
gcacagtctatccattacgaaagtcttaggtcggcaaaaccatttgttgccttaaactgc
agcggttttagtccggatttattggagagcgaattattcggatataaagccggggccttc
acgggtgccaataaagataagaaagggttattggaagaagctaatgggggtactttgctg
ctagatgaaatcggcgagatgaacctcgatttacaggcaaaattgttgcgtgttctggaa
agtcagacttttatcaaagtaggcgatacccaaacccaacaggtaaatgttcggatttta
gcagctaccaataaagatttaaaagctgatgcactatcaggaaaattccggtctgatctc
tactaccggctttcagttttcaccatcaccttgcctccactacgtgagcgtaaagccgac
atccctgcactggccatacattacctgaaagaatttgccaataaggtaaatcgatcggca
ccaaaaatggatgataaaatcttatccatattgagcgtacacagttggaaaggaaatatt
cgtgaattaaaaaacgtaatcgagcgtttggttattttatcagatggcgatgtcttaagt
actgcagctctcccacccgaattctttgagtttataccaatagaaaacgattataacctg
caacagatagaaaaacagcacattcaaaaggtgcttatccacaccaaagggaacaaaacc
gaaacttcgaggttattgggaatcggtttaactacactttaccgaaaaatagaggaatat
cagattagagaggtttaa
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