Pedobacter sp. KBS0701: FFJ24_001550
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Entry
FFJ24_001550 CDS
T06361
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00470
D-Amino acid metabolism
pek00550
Peptidoglycan biosynthesis
pek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FFJ24_001550 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FFJ24_001550 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
FFJ24_001550 (murD)
Enzymes [BR:
pek01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FFJ24_001550 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
Precursor biosynthesis
Amino acid ligase
FFJ24_001550 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QDW28109
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Position
430051..431397
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AA seq
448 aa
AA seq
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MAGHGRVVILGAGESGVGAAKLAQAKGFGVFVSDYGVIADKYKAALEKLGVPFESEKHTE
ELILNATEVIKSPGIPPTAPIIKKLVAQGIPVISEIEFAGRYTNAKTICITGSNGKSTTS
LLTYHILKNAGLNVGLAGNIGQSFAAQVATEDYEYYVLEISSFMLDDMFKFKADIAVLLN
ITPDHLDRYDYKLENYAASKMRIVQNQTADDVFIYCADDEESLKAIALTKPLAKTYPFSI
VKKVETGAYLEENTIHILTEPNNQLTMSISDLALQGKHNIYNSMASGIVSKVLELRNETI
RESMGNFKNIEHRLEHVAKISGIDFINDSKATNVNSTWYALESMTSDVVLIMGGVDKGND
YNMLKDLVKSKVKAIVCLGKDNRRIHDAFEDDVEIIVNTFSAEEAAQIAFHLAKRGDVVL
LSPACASFDLFKNYEDRGNQFKAAVREL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcatggtcgtgtagttattttaggtgctggtgaaagtggtgttggcgccgca
aaattggcacaggcaaaaggcttcggtgtttttgtttccgattatggggtaatcgccgat
aaatacaaagccgcattggaaaagcttggcgtaccattcgaatctgaaaagcatactgaa
gaattgattttaaatgctacggaagtaattaaaagtccgggtattccgccgacagcgcca
attattaaaaaacttgtagctcaaggtattccggtgatttcagaaatcgagttcgccgga
agatataccaatgcaaaaacaatttgcattaccggttcaaatggtaaatcaactacgagc
ctgttaacctatcacatcttaaaaaatgccgggttaaatgtaggcttggccggtaatatc
ggacagagttttgctgcgcaggtggctacagaagattatgaatattatgtgctggaaatc
tcaagttttatgctcgatgatatgttcaagtttaaagccgatatcgcagttttactgaac
atcacaccagatcatttagatcgctacgattataaactggaaaattatgccgcatccaaa
atgcgcattgtccaaaaccaaacggcagatgatgttttcatctattgcgctgatgacgaa
gaaagtttaaaagcaatcgctctaacaaaacctttggcgaaaacctatccattttcaatt
gttaaaaaggttgaaactggtgcttacttagaagaaaatacgatacatatccttacagaa
cctaataaccaactaaccatgtctatttcagatttagccttacagggcaagcacaacatt
tataattctatggcctcaggcattgtgtctaaagttttagaattaagaaatgaaaccatc
cgcgaaagcatgggtaatttcaagaatattgagcacaggttagaacatgtggccaaaatt
tcggggatcgattttatcaacgatagtaaagccacaaatgtgaactccacttggtacgct
ttagaaagtatgaccagtgatgtagtgctgattatgggtggtgtggataaaggtaacgat
tataacatgcttaaggatttggttaaaagtaaggtaaaagccattgtttgtttaggtaaa
gataatagacgtattcacgatgcttttgaggatgatgtagaaataatcgtaaatactttt
tcggctgaagaagctgcgcagattgctttccacttggctaaacgtggcgatgtagtattg
ttatcgcctgcatgtgcaagttttgatttatttaaaaattatgaagaccgcggtaaccag
tttaaagcggcagttagagaattataa
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