Pedobacter sp. KBS0701: FFJ24_001655
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Entry
FFJ24_001655 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_001655
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_001655
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QDW23599
LinkDB
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Position
456606..458495
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AA seq
629 aa
AA seq
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MKKYIKRLLLIGMIWAGTGMVSCKKYLDRDPEATVTAESAFKDFRSFQGFTEELYNCIPD
FTNRYWTNSFNWGEDEIQSTVQNFHFVNKIDNGDFWGWQREFDGWGAGFLDNANANTNND
RFTKGLYPLAWYGIRKANLGLENLNLMVNATDEERNLIRGQLLFFRGWFHFQLMQYFGGL
PYIDKVLPADEELRLPRLKYQECAAKAALDLRAAADLLPINWDNTTAGIQTLGKNQLRIN
KIMALGYLGKNYLWAASPLMNLESTGSKTYNAELSKKAAAAFAELLKLTESGVAPHKLLP
FAQYSTNFYTTGQNFLIPGGTEVIFTGPYWGAHGSTYGTAKQYTPAIVGADALVFAPTAN
YVNYYGMKNGLPISNSAQADPSGSGYDPQFPWRDRDPRFYNDIIYDGVKVVQGTLAANME
PHRYANLYTNGSYRDERSGSRTGYMMFKFVPRTANNFDQGWNYGQNLNIKVSYMRLADIY
LMYAESVAAGYDSPGATAEGFSKTAVDAINVIRDRAGVGHVATQFLASTAEFMKEVRRER
AVELAFEGHRFNDLRRWHLLAEVPYTLKTAAEFDRAAPLNTTTDTKLNKVVNYRERLILQ
RPFSEKHYWLPLKRADVNMYKEFAQNPGW
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatataaaacgcctattattaataggaatgatttgggcgggaaccggcatg
gtatcttgtaaaaaatatttagacagggatcccgaagcaactgtgacggcagaatctgcc
tttaaagactttcgtagttttcagggttttaccgaagagctctataactgtattccagat
tttaccaatcgttattggaccaacagtttcaactggggtgaagatgaaatccagtctaca
gttcaaaatttccactttgttaataaaattgataatggtgatttctggggatggcagcgt
gagtttgacggatggggtgcaggatttttagataatgccaacgccaatacaaataacgat
cgttttaccaagggcctctatccattagcctggtatggcattcgtaaagcaaatttaggt
cttgagaacctgaaccttatggtaaatgcaactgatgaagaacgtaatctgatcaggggt
caactgctgttttttagaggctggttccattttcagctcatgcaatattttggagggctt
ccttatattgacaaggtattgccagccgatgaagaattgagattgccgaggctaaagtat
caggaatgtgcagcaaaggccgcgctggatttaagagcagccgccgatcttttgccaatc
aattgggataatacaacagccgggatccaaaccctgggtaaaaaccagttgcgcattaat
aaaatcatggcgctaggttatttaggtaaaaactacctgtgggctgctagtccattaatg
aacttagaatctactggtagcaaaacctacaatgcagaactgagtaaaaaagcggctgct
gcatttgccgagttattgaaactaacagaaagcggagttgctcctcataaattattgcct
tttgcacaatacagtaccaatttttacacaaccggtcaaaatttcttaatcccgggaggt
actgaagtcatatttacagggccatattggggcgcacatggttcaacctatggtacggca
aaacagtatacaccagcaattgtaggtgccgatgcactggtatttgcgcctaccgcaaat
tatgttaattattatggaatgaagaatggcttgcccatttcgaattctgcccaggctgat
cccagtggctcaggatatgatccgcaatttccctggcgtgatcgggatcccaggttttat
aatgacattatatacgatggggttaaagtggtacagggaactttggccgcaaatatggaa
ccacaccgatatgcaaacctgtatacaaacggcagttacagagatgaacgttctggtagc
cgtaccggatatatgatgttcaaatttgtgcccagaactgccaataactttgatcagggc
tggaattatggacagaatctgaacattaaggtttcatatatgcgtttggccgatatatac
ctgatgtatgcagaatcggttgctgcagggtacgactccccaggcgcaaccgcagaggga
tttagcaaaactgccgtagatgccatcaacgtaattcgggatcgtgccggtgttggtcac
gttgccacacagttcttagcatcaacagcagaatttatgaaagaagtaagacgcgaacgc
gctgttgaacttgcctttgaaggacatcggtttaatgaccttcgtcgctggcatttgctt
gccgaagtaccatatactttaaaaacagccgcagaatttgatcgtgctgctcctttaaat
accacaaccgataccaaattaaacaaggttgtaaactatcgcgagcggttaatattacaa
cgcccatttagtgaaaagcattattggctgccacttaagcgagcagatgtaaatatgtat
aaggagtttgcgcaaaaccccggatggtaa
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