KEGG   Pedobacter sp. KBS0701: FFJ24_002505
Entry
FFJ24_002505      CDS       T06361                                 
Name
(GenBank) HD domain-containing protein
  KO
K00974  tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
Organism
pek  Pedobacter sp. KBS0701
Pathway
pek03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pek00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FFJ24_002505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pek03016]
    FFJ24_002505
Enzymes [BR:pek01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.72  CCA tRNA nucleotidyltransferase
     FFJ24_002505
Transfer RNA biogenesis [BR:pek03016]
 Eukaryotic type
  3'processing and CCA adding factors
   CCA adding factors
    FFJ24_002505
 Prokaryotic type
    FFJ24_002505
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 Gad2 PAN2_N NTP_transf_2 CDRT4
Other DBs
NCBI-ProteinID: QDW23754
LinkDB
Position
complement(652635..654041)
AA seq 468 aa
MQQHLQNPIFKTLSLIADKSRTEAYVIGGFVRDLFLDRPSKDIDVVVVGSGIEYAEAVGR
KLGTKVAVFKNFGTANIKYQDLEVEFVGARKESYRSDSRKPIVEDGTLEDDQLRRDFTIN
ALAINLNAAHFGELLDPFDGVKDLENKLIRTPLDPEITFSDDPLRMMRAIRFASQLNFDI
DPAALNAIKTQKQRISIVSRERITDEMNKIILSKKPSIGFKHLFNTGLLHIIFPQMAQLY
GVEIIKGKGHKDNFYHTLEVLDNICADTDDLWLRWAAILHDIAKPATKRFEEGHGWTFHG
HEDRGARMVPKIFAQLKLPLNEKMKYVQKLVQLHLRPIVLAQETVTDSAVRRLLFDAGEE
IESLMLLCNADVTTKNEYKKTKYRNNFELVKQKLKDVEERDKIRNWQPPISGNDIMETFA
LNAGKEVGIIKNAIREAILEGEITNDYQEAFNFMLNQAKQMGLNPVNK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcaacaacacctacaaaatccaatatttaaaactttatccttaattgccgataaaagc
agaaccgaagcttatgtcatcgggggatttgttcgcgatttatttttagatcgcccttca
aaagatattgatgtagttgtggtgggtagtggaatcgaatatgcagaagctgtaggccga
aaattaggtaccaaagtggctgtatttaagaactttggtacggcaaacatcaaatatcag
gatttagaggtcgaatttgtaggagcgagaaaagagtcataccgatcggattcgcgtaaa
cccattgttgaagacggcactttagaagacgatcagctccgcagggattttaccatcaat
gcattggcaattaatttaaatgctgcgcattttggcgaacttttagatccttttgatggg
gttaaagatttagaaaataaactgatccgtaccccgctcgatccggaaattactttttcg
gatgatccattgcgcatgatgcgggccatccgctttgcttcacaacttaatttcgatatc
gatccggcagcgcttaatgccattaaaacacagaagcagcgcatcagcattgtttccagg
gagcggattactgatgagatgaataaaatcatcttatctaaaaaaccgtctataggtttt
aaacatctttttaataccggattattgcatatcatttttcctcaaatggcacagctttat
ggcgtggaaattattaagggaaaaggccataaagacaacttctaccacactttagaggta
ttggataacatctgtgcagataccgatgatttatggttacgctgggcagctattttgcat
gatattgccaaaccagcaaccaaacgttttgaagaaggccatggttggacatttcacggt
catgaagaccgtggcgcccgcatggttcccaaaatttttgcacaactaaaacttccttta
aatgaaaagatgaagtatgtgcaaaaactggtgcagcttcatttacgcccgattgttctg
gcacaggaaaccgttactgattctgccgtaaggcgattactttttgatgccggagaagaa
attgaaagcttaatgttactctgcaatgccgatgtcacaacgaaaaacgaatacaaaaaa
acaaaatatagaaataactttgaactggtaaaacaaaagctaaaggacgtagaggaacgc
gataaaatcagaaactggcaacctccaatttctggtaacgatattatggaaacttttgct
cttaatgcaggcaaagaagtcggcataattaaaaatgccatccgtgaggcgatattggaa
ggtgagatcacaaatgattaccaggaagcgtttaattttatgctcaatcaggcaaaacaa
atgggattaaatcctgttaataaataa

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