Pedobacter sp. KBS0701: FFJ24_003180
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Entry
FFJ24_003180 CDS
T06361
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pek01002
]
FFJ24_003180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
FFJ24_003180
Peptidases and inhibitors [BR:
pek01002
]
Cysteine peptidases
Family C82
FFJ24_003180
Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FFJ24_003180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
NIR_SIR
Motif
Other DBs
NCBI-ProteinID:
QDW23883
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All DBs
Position
794796..796358
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AA seq
520 aa
AA seq
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MKKFRFLILPFILFVSACGWFKSPPEIGKVLSEHFKNKIYKDFDTVAYDSVFVKTIDSLS
SKFVNPKTIKAFYANNNAQPKLVTQFYINGELDSLVSYLDQSKVHGFNPKIFKGDEIKAL
LDELTTNKFKKVEESYPVIAKLELLSANAYLNYNNYLKYGVINPRSIFSRYYIKVRRPDS
VGMLNLLNSKNMLDTLRAVQPKSVQYKALQRAYLNTDSESEKRILLLNMERFRWKMPETG
DNYVQVNIPDFRLTWLDKTDTVITMKVCVGGKRENGYEEKLKAFAKSGNLDDKPKNHETP
LLFSKINSIQANPIWNIPVSIAQSEIYWMARKDPFYLSNSNIKVYYKDKLIGEPDTINWN
KYSRDKLPFKFKQGSGGGNALGKFKFIFDNSSSIYLHDTNNKNGFNLTNRAISHGCVRIE
KPLEFAELLVKDSYTYDKLRAEVDLPPIDSTHVKWYKKRMAQKADTTKTFQLKPAWFGPK
KAVPLIITYITAWSQNDKIEYRPDVYGMDEKLWAAMKKFR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagtttcgctttctaatactaccctttattttatttgtttcagcctgtggatgg
tttaaaagcccaccagagatcggcaaagtactgtctgagcatttcaaaaataaaatttat
aaagattttgatactgtagcttatgatagtgtttttgtgaaaacaatagacagtctttca
agtaaatttgttaaccctaaaactataaaagcattttatgccaataataatgctcagcct
aaattggttacgcaattctatattaatggagaactggattcattagtgagttatttagat
caaagcaaggtgcatggctttaatcccaagatttttaaaggagacgaaattaaagccctg
ttggacgaattaactaccaataaatttaaaaaagtggaggaaagttatccggtaattgcc
aaactagaactgttatcggcaaatgcttatctgaattataacaactacctgaaatatggc
gtgataaatccccgttctattttctcacggtattacataaaagtgaggcgtccggacagc
gttggaatgcttaatcttttgaacagtaaaaacatgttggatactttaagagctgttcag
ccaaagtcggttcaatataaagctttacagcgcgcctatttgaatacagattctgaaagt
gagaagcggattttattattgaatatggaacgtttccgttggaaaatgccagagactgga
gacaattatgtgcaggtaaatattcctgattttagattgacctggcttgataaaacagat
accgtaattacgatgaaagtttgtgttggtggcaagcgcgaaaatggttacgaagagaag
cttaaggcctttgcaaaatcgggtaatttagatgataaaccgaagaatcatgaaacacct
ttattgttcagtaaaatcaattccattcaggccaatcccatctggaatattccggtaagt
attgcccaaagtgaaatctattggatggcaagaaaagaccccttttatttgtcgaacagt
aacattaaagtttactataaagataagctaattggtgagcctgataccatcaattggaac
aagtattcaagggataaattaccattcaaatttaaacagggatcgggtggcggaaatgcc
ttaggaaagttcaaatttatcttcgataatagctcgagtatttacctgcacgataccaat
aacaagaacggatttaacctaaccaatcgggccattagtcatggttgtgtgcggattgaa
aaaccgcttgaatttgccgaacttctggtaaaagattcttacacttatgacaagttaaga
gcggaagttgatttaccaccaatagatagtacgcatgtaaaatggtataaaaaacgcatg
gcccaaaaggcagatactacgaaaacttttcagttaaaaccagcgtggttcggaccgaaa
aaagccgttccattaattatcacatacattacagcctggtcgcaaaatgataagattgaa
tatcgaccagatgtgtatggcatggatgagaaactttgggctgcgatgaagaagtttagg
taa
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