Pedobacter sp. KBS0701: FFJ24_003405
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Entry
FFJ24_003405 CDS
T06361
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pek03000
]
FFJ24_003405
Transcription factors [BR:
pek03000
]
Prokaryotic type
Helix-turn-helix
GntR family
FFJ24_003405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
Fe_dep_repress
HTH_24
HTH_DeoR
PaaX
HTH_Mga
MarR_2
TrmB
HTH_5
HTH_8
HTH_10
HTH_Crp_2
RP-C
HTH_36
HTH_41
DUF4423
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
QDW23924
LinkDB
All DBs
Position
complement(855036..855770)
Genome browser
AA seq
244 aa
AA seq
DB search
MKLTIDHKSQVPLHVQAEALLRKLIENPEYVGGKLLPNEVELSKELGISRTTLRQSINKL
VYDGLLIRKKGVGTKVAASKSLSSKSKNWMSFSQEMSARGIPIRNFELHVSWVYPDKRLA
SFFQIKEDKKVLKLVRLRGRPEGPFVYFESYFHPGVGLTGEEDYKAPLYEMLEKEHSVVA
MISKEEISALLADEFIAAKLEANVGSPILFRKRFVYDIDEKPIEYNLGFYKADSFIYTVE
SRRD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacaatagaccataaaagtcaggtgccattacatgtacaggcggaagcattg
ttaaggaaattaattgaaaaccccgaatatgttggtggcaaactgcttcccaacgaagta
gagttatcaaaagaattaggcatatcacgcactactttacgccagtcgataaataaactg
gtttacgacggcttgcttatacgcaaaaaaggggtcggcactaaggtggccgcatcaaaa
tcgctgagttcaaaatcgaagaactggatgagtttttctcaggaaatgagtgccagggga
attccgatccgaaatttcgaattacatgtaagctgggtatatcccgataaaagactggca
agttttttccagatcaaggaagacaaaaaagttttaaaattggttaggctaaggggccgc
cctgagggtccgttcgtatattttgaatcatacttccatccaggtgtgggtctaactggc
gaagaggattacaaagctcccctttatgaaatgctggaaaaggaacattcggtcgttgcg
atgatctccaaagaggaaatcagtgccttgctcgcggatgaattcatcgcagccaaactg
gaggcgaatgtaggctcgcctatcttattcaggaagcgttttgtgtatgatattgacgaa
aaaccaatcgaatacaacctcggattttataaggcagatagcttcatctatacggttgaa
agcagaagagattag
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