Pedobacter sp. KBS0701: FFJ24_003425
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Entry
FFJ24_003425 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_003425
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_003425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
RelB_leu_zip
Motif
Other DBs
NCBI-ProteinID:
QDW23927
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Position
862633..864255
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AA seq
540 aa
AA seq
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MKFLNKNLIIAFSLLAFAGCKKLDIAPTDRFSDLTFWTVDVNVSSALNNNYSLLYNSSLY
FEPEALSDNAYSPSGDLNLIASGNATSLTAKFAGDWTSYYKTIKSVNIFLENVDQNKTLP
AATIARMKAENQFMRAFALFNLSKWYGDVPLPDHDLTPEEAQVIPRTSKAAVSDYIIAQL
ESAIPNLPSKDQLPASENGRITKAAALALEMRTLLYQGNKMAEVVAVCEKLINNQATYGT
YSLTPNYSALFSDPATNKTNSESILSLQYVPTVRTWQNFWDFAPRTVGGRVSAMAPTQEL
VDDYIMLNGKGIKEAGSGYVESNPYVNRDPRLTATVVYDRYTWVNPNNSTKTIYIRPGSD
PVQPGLDEYSPGSQSASATGYYWRKYFDPIALSSFVSGNNLHLFRYAEVLLTYAEAKNAL
GQMDATVWAKTIGALRSRAGFTDAAALSFPSGDLTAVIRRERRAELAMEGLRTDDIRRWR
VAEVTMNGFAHGAKFATDQNVDGGYIRTQQRKFNPQRDYLWAIPSSEVSLNKNLTQNPGY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttaaataaaaacctcatcattgctttcagtcttcttgcttttgcagggtgt
aaaaagctcgatattgcgccaacggaccggttttcggatttaacattctggaccgttgat
gtaaacgtaagcagtgcccttaacaataattacagcttgctttacaacagctcattgtac
tttgagccggaggcactctctgataatgcttactctccttcaggcgacctcaacctcatt
gcaagcggaaatgcaacttcccttaccgcaaagtttgccggagactggacaagttattat
aaaaccataaaatcagtcaacatatttttagaaaatgtagaccaaaacaaaaccctccca
gcggctacgattgccaggatgaaagctgaaaaccagtttatgagggcttttgcattgttt
aacctgagtaaatggtatggcgatgtgccccttccggatcatgatcttacaccagaggag
gctcaggtgattccgcgtacctcaaaggcggcggtaagcgactacattattgctcagctt
gaatctgctatacccaatcttccaagtaaagatcagctcccggccagtgaaaacggtagg
attacaaaagctgcggcacttgccctggagatgagaacattgctttaccagggaaacaaa
atggctgaagtagtggcggtttgcgaaaagttaattaacaatcaggcaacctacggcacc
tattcattaaccccaaattacagtgctttatttagcgaccctgcaaccaacaaaaccaat
agcgaaagtatactatcccttcaatatgttccaacagtcaggacctggcagaatttctgg
gatttcgctccaagaacagttggcggaagagtgagtgcgatggctccgacacaggagctg
gtagatgactacatcatgctcaacggaaaaggaatcaaagaagcaggttcagggtatgtg
gaaagtaacccttatgtaaaccgcgatccaaggctcaccgcaacagtggtttacgatcgg
tatacatgggtaaatccaaacaatagcaccaaaacgatttacatcaggccaggttcagac
cccgttcagccaggcttggatgaatattcgccaggttcgcaaagtgcttctgctacaggt
tattattggcgaaaatacttcgatccaattgctttatcaagttttgtatccggaaataat
ttgcaccttttccgttatgcggaggtattgctcacttatgcagaagcgaaaaacgcttta
gggcagatggatgccaccgtatgggcaaaaacaattggtgcgctccggtcgagagctggt
tttaccgatgcagcagccttaagttttccatccggagatttaaccgctgttattcgtcgt
gaacgtagggctgagcttgcaatggaaggtttaagaactgatgacatcagacgctggaga
gtggcggaagttaccatgaatggctttgcccacggtgcaaaatttgcaactgaccaaaac
gtagatggtggctacatcagaacacaacaacgcaagttcaatccgcaaagggattactta
tgggcaattccgtcaagcgaggtaagcctgaacaaaaatttaacacaaaaccctggttac
taa
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