Pedobacter sp. KBS0701: FFJ24_006080
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Entry
FFJ24_006080 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_006080
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_006080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QDW24411
LinkDB
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Position
1542661..1544322
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AA seq
553 aa
AA seq
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MKMKKKIYVMQIVLAVVLMSFAACKDEFFEPSYSEGPVNEEAIWNTDRRVREYLNNGYNY
MLARYNVDGSGALMASGSDEAVNSNLNSNVNIFNNGNWSSLRTFDEQYTNLYNGLWVVNT
FLERSPTAVIFPASDLRGLRGEAFFLRGLFHYELFKRYGGIVLATRSFSPVEDLNIPRNA
VDDVVKQIVKDCDSAINQIPAASTRDWDAANYGRATKAAGMALKAKTLLVYASPLYNPGN
DLQRWQNAANAAKDLIDLNKHSLLSTALFPNLWDYTTAATSYNNEVIFATPASNTNAIEA
NNAPISFTGGLGRTNPTQNLVDAFEMTNGKPITDPASGYDPQNPYANRDSRLNQFIVFNG
ANFKTGSLTRAVETYEGGRDNVPSNVNSTKSGYYLRKFLSGNATYNITGTTSVRRPWVLF
RYAEILLIYAEALNEFSGPDAAVYASINAVRNRAGMPALAGLTQSQMRDRIKNERRVELC
FEEQRFFDVRRWKDGESNFNGAVRGMKITKVGTALTYSPFVIENRIFTSKNYWYPFQQTE
LNKANKLIQNPGY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaaagaaaatatatgtaatgcaaattgttttggctgttgtgctgatgagc
tttgctgcctgcaaagatgaattctttgaaccttcctacagtgaaggtcccgttaatgaa
gaagccatctggaataccgacaggcgtgtgcgggagtatttaaacaacggttacaattat
atgctggccaggtacaacgttgacggctcaggtgcattaatggccagcggaagtgatgaa
gccgtaaattcaaacttaaacagcaacgtaaacatctttaataatggcaactggagcagt
ttaaggacttttgatgagcagtataccaatctttataatggcttatgggtggtgaatacg
tttttggagcgatcgcccacggctgtaatcttcccggcaagcgatcttcgcggattaaga
ggagaagcattttttctgaggggtttatttcattatgaattgtttaaaagatatggcgga
attgtcctggccacccggtccttttcacctgtagaagacctgaacattccccgcaatgct
gttgatgatgtggtaaaacaaattgttaaagattgcgattcggcaatcaatcagattcct
gcagcttctaccagagattgggacgctgccaattacggacgtgcaacaaaggctgcggga
atggcgctgaaagctaagacactgctggtttacgcaagtcctttgtataacccgggtaac
gacctgcaacgctggcaaaatgccgcaaatgccgcaaaggatttaatcgacttaaataaa
cacagcttattgagtacggccttattcccgaacttatgggattacaccactgctgcaact
tcttacaacaatgaggttatcttcgccacaccggcaagtaataccaatgcaatagaagca
aacaatgcgcccattagcttcacaggcggattgggcagaacaaaccctactcagaatttg
gttgatgctttcgagatgaccaatggtaagcccataaccgaccctgcatcaggctatgat
ccgcaaaatccgtatgcgaacagagattcgcgtttaaaccagtttattgtttttaacggt
gcaaattttaaaacaggcagtctgacccgggctgtggaaacttatgaaggcgggcgtgat
aatgtgccttccaatgtaaacagtacaaaatccggttattacctgcgaaagtttttgagt
ggtaacgctacttacaacatcacggggaccacaagtgtaagacggccctgggtcttgttt
cgttatgcagaaattttgctcatctatgcagaagccctgaatgaatttagcggtccggat
gcagcggtttatgcttccataaatgctgtacgtaaccgtgcaggaatgcctgcactggcc
gggttaacacaatcgcaaatgcgtgaccggattaaaaatgaacgccgggtggaattgtgt
tttgaagaacaacggtttttcgatgtccgccgctggaaggatggggaaagtaattttaac
ggagcggttagggggatgaaaatcacgaaggtgggtactgcactcacctatagccctttt
gtaattgaaaacagaatctttaccagcaagaactattggtatccttttcaacaaactgaa
ctcaataaggcaaataaacttattcaaaatccagggtattga
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