Pedobacter sp. KBS0701: FFJ24_006835
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Entry
FFJ24_006835 CDS
T06361
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00550
Peptidoglycan biosynthesis
pek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FFJ24_006835 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pek01003
]
FFJ24_006835 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
FFJ24_006835 (pbpC)
Enzymes [BR:
pek01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FFJ24_006835 (pbpC)
Glycosyltransferases [BR:
pek01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FFJ24_006835 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
FFJ24_006835 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QDW24547
LinkDB
All DBs
Position
complement(1743401..1745782)
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AA seq
793 aa
AA seq
DB search
MNKIPKAFLISDLICFVLLLAFLFALPSKLFKTTTSYVIEASNGNLLSAAIASDGQWRFP
VADSVPVKFKDCIIAFEDKRFYNHFGVDILAMSRAMRQNWRAKSVVSGGSTLTMQVIRLS
LKQDRTVWQKLLEVILAVRLEIRYSKEEIIGLYAANAPFGSNVVGLEAASWRYYGRDAQT
LSWGEMATLAVLPNSPSLVHPGKNSSRLIKKRNDLLDKLARLKYIDQATANLAKLEPVPG
KPMPLPQNAPHLLNRFKAERASLKINSTRITSTLDENIQLKVNSILKRYNNRYRANDINN
ISALVLDARTGHVVSYVGNIYQPENADLQSHVDMIKAPRSPGSTLKPLLYASMMNDGFIL
PHTLIPDIPTQIAGYSPQNYDLGYDGAIAADKALSRSLNIPAVKMLQQYKYERFYDKLKK
LGIGTLNQQADHYGLSLILGGSEVTMWDLANTYMGMVRTLNHFNTYKGLYNPEDYKQATY
FNNKTKEEKDYQRNSFLDHGAIWATFNAMEEVMRPGDEGLWEQFSSSQRIAWKTGTSFGF
RDAWAVGLTPNYVVCVWVGNADGEGRPGLVGIEAAAPVLFDIFRLLPNGKWFETPTTKLK
KLKICKKSGYKAAEYCTDVVQELVPVSGEKTSICPFHKLVHLDRTGTFRVTDQCESITNM
QHKSWFILPPAMEYYYKIKNSDYKSLPPFKAGCELSGGNSVMEIIYPKNNAIVYIPLEQD
GSRGKIVINAAHRNPGAKIYWHIDNEYVSTTTNFHQLAISPPPGKHTLTLVDENGERLVQ
VFTVLDKEKKGEK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatcccaaaagcatttctcatttctgatctcatctgttttgtcttgcttttg
gcatttcttttcgctttaccctccaaacttttcaaaacaactacttcttatgtaattgaa
gccagcaatggcaatttactgagtgctgcaattgccagcgatggccagtggcgcttcccg
gtggccgatagtgttcctgtaaaatttaaagattgcattatcgctttcgaggataaacgg
ttttataatcactttggtgtggatattttggccatgagcagggccatgcgacagaactgg
cgagccaaaagcgttgtaagtggtggcagtaccttaaccatgcaggtaattcgcctctca
ctaaaacaagaccgaacggtttggcaaaaattattggaggtgattttagcagtacgctta
gaaataagatactcaaaggaagaaattattggcctatatgctgctaatgcgccttttgga
agtaacgttgtgggtttggaggctgcaagttggcgctattacggacgcgatgctcaaacg
ctttcctggggcgagatggccaccttagccgttcttcccaacagcccgtcgttggttcat
cccggtaaaaactcgagcaggctgatcaaaaaaagaaacgatttattagataagttagcc
aggctaaaatacatcgatcaggcaacggctaatttagctaagttagagcctgttccgggc
aagcccatgcccctaccgcaaaatgcgccacacttattaaaccgttttaaagcagaaaga
gcaagtttaaaaatcaattctacgaggattacgtccacattagatgaaaacatccagttg
aaagtaaactcgatattaaaacgctataacaaccgctatagagccaacgacattaataat
atttcagctttagtgcttgatgccagaactggtcatgtggtgagttatgtaggtaatatt
taccagccggaaaatgctgacctgcaaagtcacgtagatatgattaaggcgccgcgcagc
ccgggtagtaccttaaaacctttgctttatgccagcatgatgaatgatggattcatattg
ccgcacaccttaattccagatatcccgactcaaatagcaggttattcgcctcaaaattac
gatctgggttatgatggtgccatcgctgcagataaagcgctgagccgttcgctaaacatc
ccggctgtaaaaatgttgcagcagtataaatacgaacgtttttatgataaattaaaaaaa
ttggggatcggaacactgaaccagcaggcagatcactatggtttgtcgttaattttgggt
ggcagtgaagttacgatgtgggatttggccaatacttatatgggtatggtacgtacgcta
aaccatttcaacacctacaaaggcctctataatcctgaagattataaacaggcaacttac
tttaataataaaactaaagaagaaaaagactatcagcgtaactcatttttagatcatggt
gcaatatgggcaacctttaatgccatggaagaagtgatgcgcccaggtgatgaaggttta
tgggaacaattttcctcgtcgcaaagaatagcgtggaaaacaggtaccagttttggtttc
cgcgatgcctgggccgtaggcttaactccaaattacgtcgtatgcgtttgggtgggtaat
gcagatggtgaaggcagacctggtttggtgggaatagaagcggccgcaccggtgctcttt
gatattttcaggttattacccaacggaaaatggttcgaaacgcccacaacaaaacttaaa
aaacttaaaatttgcaaaaaaagcggttacaaggcagcagaatattgtactgatgtggta
caagaacttgttcctgtttcgggagaaaagacttccatttgtccatttcacaaattggtc
catttagacagaaccggtactttcagggttaccgaccaatgtgaaagtataaccaatatg
cagcacaaaagctggtttattttaccacctgccatggaatattattataaaataaaaaac
agcgattataaatccctccctccttttaaagctggctgtgaactctcaggtggaaatagt
gtaatggagatcatttacccaaaaaataatgcgatagtttacattcctttagaacaggat
ggatcaagaggtaaaattgtgattaatgcagcacacagaaatccaggtgctaaaatatat
tggcacattgataatgaatacgtaagcaccactactaattttcatcaattggccattagt
ccgccaccaggtaaacataccttaaccttagttgatgaaaatggagaacgcctggtacag
gtttttacagttttggataaggagaagaaaggtgaaaagtag
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