Pedobacter sp. KBS0701: FFJ24_006895
Help
Entry
FFJ24_006895 CDS
T06361
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pek03000
]
FFJ24_006895
Transcription factors [BR:
pek03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FFJ24_006895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Peripla_BP_3
LacI
HTH_11
MarR_2
OKR_DC_1_N
HTH_36
Sigma54_DBD
HTH_3
MarR
Motif
Other DBs
NCBI-ProteinID:
QDW24559
LinkDB
All DBs
Position
complement(1762836..1763855)
Genome browser
AA seq
339 aa
AA seq
DB search
MMNNTPVTLKFLAEKLKMSVSTVSKALNNYPTINAYTRQRVQEMARDLHFTPNKSAINLK
EKRSRIIGVILPNLLDHFFTRSIYGIEQFATQNGYNVIISQSHDELEKEIQSANMLLRSR
VDGLIVAISKYTQDFAHLNQFENIGIPVVYYTRNPSFNLNCHKVLCNTFQGCYQATKFLI
DRGHQKIAYLGGPKMINFTHDRFNGYINALKDKELPFSSELVAYTDFDKENTISAIKNLF
IYPENKPTALVAFKEPILFDAIKYLKSTNHLNTNKLECIGFGNTSFISYLDSPPIASVEE
NPESVGENAISLLIQLINKEIDIHNYQKVMVDCKLMVHG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatacccctgttacactgaaattcctggctgagaagttaaagatgtcagtt
tcaacagtatcaaaagcccttaacaattacccaaccataaacgcatacaccaggcagcgt
gttcaggaaatggcacgcgatctgcattttacgccgaataaatcagctatcaatttaaaa
gaaaagagatcgcgcattattggcgttattttacccaatcttttagatcacttttttacc
aggagtatttatggaatagagcagtttgccacacaaaatggatacaatgtgattatcagt
caatctcacgatgagctggaaaaagagattcaatctgcaaatatgctgttacggagccgg
gtagatggcttaattgtggctatttcgaagtatacacaagattttgcacacctaaaccag
ttcgaaaacataggcattccggtagtatattatacccggaacccgagttttaacctcaac
tgccacaaagtattgtgcaatactttccagggctgttaccaggctaccaagtttctaata
gacagggggcatcagaagatcgcttatttgggtggccccaaaatgattaatttcacgcac
gatcgctttaatggctatatcaatgccttaaaggataaagagctacctttttcatcagaa
ttagttgcttataccgattttgataaggaaaatacaatctcggcaattaagaatttgttc
atctatccggaaaataaacccactgcacttgtggcttttaaagaacctatcttattcgat
gcgatcaaatacctaaaatccaccaaccacttgaacactaacaaattggaatgtatagga
tttggcaacacttctttcatcagttatctcgattcaccccctatcgcctctgttgaagaa
aaccccgaatcggtaggtgaaaatgcaatttctttattgatacaattgattaacaaagaa
attgatattcataattaccaaaaagtaatggtcgattgtaagttgatggtgcacgggtaa
DBGET
integrated database retrieval system
