Pedobacter sp. KBS0701: FFJ24_006935
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Entry
FFJ24_006935 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_006935
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_006935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QDW24565
LinkDB
All DBs
Position
complement(1771518..1773389)
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AA seq
623 aa
AA seq
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MLHCNPMKNIIKLLLAALLFSSTSCKKYLDVVPSEYSSENDVYNNINLTEQALARLYNAL
PNELTSPLTAATDETYHHWFDNGEAVDAYKYNLGAWSTNDNPYGNWSGKYQDIRRANIFI
KRIDAVPVPLDRESYYAIWKPRYKAEARFLRAQFYFELFKRYGAVPLITSSNDVDPGNLE
DTQVARNSVDEVVNFITSECDEISAALPLTQEAAQTGRITRGAALALKARTLLYAASPLF
NGNPIYASIKNKDGKVLFNSSYDKEKWKKAADAAKAVIDLGIYKLYAPFPDNPVQNYAAQ
FYTRDYTETILQRILSNSTDIDGNYLPNGSPFKGNGKLTPLQQFVDAYEMKNGYPINQTG
SGYNTTGVWSGQLWDGLKFQTVSNISNMYKDRDPRFYASIFFQYDVWRFDATKRPVRLAW
YGAGNGITDGWATGKSGTNPWGYNVRKFLSPGYDRNANSGTGTRNFPIFRLAEIYLNYAE
AMNEYLDAPDPSVYQYLNLVRSRVAMPNLPILPADNTKGGMRNRIQNERRVELAFESHRF
WDVRRWLIAKTVDNAPALGLNARPSAAELSSTGLDVSSEAAGVAVFYKTVILQNRVFADK
HYLMPIPQSEIDKDPNLVQNYGW
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattgtaatcccatgaaaaacataatcaagctgcttttggcagcactactattc
agcagcacgtcctgtaaaaaatacctggacgttgttccctccgaatattcgagcgaaaat
gatgtttataacaatatcaatctgacagagcaggcgttggcccgtctatacaacgcacta
ccgaatgagctgacctcacccttaactgctgcaacagatgaaacctaccaccactggttc
gataatggagaggcggtagatgcctacaaatataaccttggcgcatggagcaccaatgat
aatccgtatggtaactggtctggcaaataccaggatatccgcagggccaatatctttatt
aaacgcatagacgcagttcctgtaccgctggatcgggaaagttattatgcgatttggaaa
ccacgttacaaagctgaggcccgttttcttcgcgctcaattttactttgaactttttaaa
cgctatggagcggttccattaattaccagctcaaacgatgtagaccccgggaacctggaa
gatacccaggtagcacgtaattcggtagatgaggtcgtaaattttatcacttcagaatgt
gatgaaatttcagctgcattgccactcactcaggaagcggcacaaaccggccgcattacc
cggggcgcggcactggcactaaaagcacggactttgctgtatgcagccagcccgctattt
aatggcaatcccatttacgccagtataaaaaacaaagatggcaaagtgctctttaacagt
agttatgataaagaaaaatggaaaaaggccgcagacgcagcaaaagcggttattgatttg
ggcatttacaaactgtatgcgccttttccagataatccggtacaaaattatgcggcacag
ttttacacgcgcgattataccgaaaccatcctgcagcgcatcctcagtaattctaccgat
attgatggtaattatctgcccaatggctccccttttaagggaaatggaaaacttaccccg
ttacagcagtttgtggatgcttatgagatgaaaaatggttatccgattaaccaaacaggt
tctggctacaatactaccggggtttggagcgggcagttatgggatggcctgaaatttcaa
acggtaagtaatatatccaacatgtacaaagatcgcgacccacggttttatgccagtatc
tttttccagtacgatgtgtggcggttcgacgccaccaagcgcccggtaagactggcctgg
tatggcgccggcaacggcataacagatggttgggcaacgggcaaatcgggtacaaatccc
tggggttataatgtccgcaagtttttgtcgcccggttatgatagaaatgccaattcaggt
accggcacgcgtaactttcccattttccgcctggcagaaatatacctgaactatgcagaa
gccatgaatgaatatcttgatgcaccagacccctctgtttatcaataccttaatctggta
cgcagtcgggtggccatgcccaacctgcccattctgcctgcagacaatactaaaggtggt
atgcgcaaccggatccaaaatgaacgccgggtagaactggcatttgaaagccaccggttc
tgggatgtaaggcgctggctaattgccaaaacagtagataatgccccagcattaggacta
aacgcccgtccttcagcagctgaactgagcagtacagggctggatgtatccagcgaggcg
gcgggggtggctgtattttacaaaaccgttatcttgcaaaaccgtgtctttgcagataaa
cactacctgatgcccataccacaatcagaaattgataaagatccaaacctggttcaaaat
tatggctggtaa
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