Pedobacter sp. KBS0701: FFJ24_007155
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Entry
FFJ24_007155 CDS
T06361
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek03030
DNA replication
pek03430
Mismatch repair
pek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFJ24_007155
03430 Mismatch repair
FFJ24_007155
03440 Homologous recombination
FFJ24_007155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pek03032
]
FFJ24_007155
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_007155
Enzymes [BR:
pek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFJ24_007155
DNA replication proteins [BR:
pek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFJ24_007155
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFJ24_007155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
DNA_pol_D_N
Motif
Other DBs
NCBI-ProteinID:
QDW24605
LinkDB
All DBs
Position
complement(1824111..1825484)
Genome browser
AA seq
457 aa
AA seq
DB search
MLYAVVDIETTGGHASANGITEVAINIHDGNQIVESYTTLINPKQPIPDYITALTGIDNA
MLKDAPTFPDVALQIYQLLNDKVFVAHNVNFDYSFLKHHLAAVGYDLQCRKLCTVRLSRK
LIPGKSSYSLGKLCTALQIPIQNRHRAAGDADATSILFNMLLDNDLEGIIPEMLKKTSKE
QVLPPHLDKASILRLPNQPGVYYFKDSKGKIVYVGKAKDLKKRVTSHFTGNTPNRQRQDF
LRTIHHVDFVICGTELMALILEANEIKRLWPENNRAMKRYEHKYDLYVFEDQNGYLRLAV
DKHKKNNNAIQSFNSLLEGYNFLTQLINKYQLCAKLCYLQKTATKCYAHENGQCFGACSG
IETVAVYNKKLNAALNDIQNQQPSFALVDEGRKEEEFSCLVVENGKFYGMGYFTNKNYLA
DGLAPIKNDLSTYQSNSYILNLILNYAEQHPQKLYKL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttatacgcagttgtagatatcgaaaccactggcggtcatgcttcagcaaatggcatt
accgaagttgccattaatatccatgatggcaatcagattgttgaatcttacactaccctg
atcaatccaaaacaaccgatcccggattacattacggctttaaccggcattgataatgcc
atgttgaaggatgcgccaacttttcctgatgttgcgctgcagatctatcagttgctgaat
gacaaggtttttgtggcgcataacgtaaacttcgattattcctttttaaagcaccatttg
gccgctgtgggctacgatttacaatgtagaaaattatgcacagtaagattaagcaggaaa
ttaattcccggtaaatcttcttacagcctgggtaaattgtgtacagccctccagataccg
atacaaaaccggcacagggctgcaggcgatgccgatgccaccagcatcctctttaatatg
ttattggataatgatctggaagggatcattccagaaatgttaaagaaaacttcgaaagaa
caggttttaccgccacatttagataaagcttctattttaagattgcccaatcagcctggg
gtttattattttaaagacagtaaaggcaaaattgtttacgtgggtaaagccaaagaccta
aaaaaacgcgtaaccagtcattttacggggaacacccctaaccggcagcggcaagacttt
ttgcgtaccatacatcatgtcgacttcgtgatctgcggaactgaactgatggccttaatt
ttggaagccaatgaaattaagcgtctttggcctgaaaacaaccgggccatgaaacgttat
gagcataaatatgatttatacgtttttgaagatcagaacggctacctgcgtttagccgtt
gataaacataaaaagaataataatgccatacagagttttaacagtttattggaaggttat
aactttttaacccagttaattaataaataccaactttgtgctaagctctgttatcttcaa
aaaacagctacaaaatgttatgcacacgaaaacgggcaatgttttggtgcctgcagcgga
atagaaaccgtggccgtttacaacaaaaaattaaatgcagctttaaacgatatccaaaat
cagcaacccagtttcgccttggttgacgaaggcagaaaagaagaagaatttagctgttta
gttgtggaaaacggaaaattttatggaatgggttattttacaaataaaaattacctggca
gatggattggccccgatcaagaacgatttatccacttatcaatccaatagttatatttta
aatttaattctgaattacgcagagcaacatccacagaaattgtataaattgtag
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