Pedobacter sp. KBS0701: FFJ24_007260
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Entry
FFJ24_007260 CDS
T06361
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek03030
DNA replication
pek03430
Mismatch repair
pek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFJ24_007260
03430 Mismatch repair
FFJ24_007260
03440 Homologous recombination
FFJ24_007260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pek03032
]
FFJ24_007260
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_007260
Enzymes [BR:
pek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFJ24_007260
DNA replication proteins [BR:
pek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFJ24_007260
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFJ24_007260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDW24625
LinkDB
All DBs
Position
1845669..1846622
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AA seq
317 aa
AA seq
DB search
MKLNLKRPLAFFDLEATGVNVGADRIVEIAILKAMPDGSELIKTWRVNPEMPIPLQTSLI
HGIYDEDIANEPTFKTLAVEIAEFIGDSDLAGYNSNKFDIPMLLEEFLRAEVDFDMNSRK
FVDVQNIFHQMEQRTLKAAYKFYCQEDLINAHAAEADVIATYKVLLGQLEMYKETEFENK
QGVKSIPVVNDVDALHIFTNINKPVDFAGRLVYNDSDEVCFNFGKHKGKTTAQVFSVEPS
YYAWMKNGDFPLYTKKKLDEEWAKFNAKKNENKAARPQNNTPANKPQYQQKPQPKPEKPA
QPINTDMLEQLKMKFGK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttaaagcgtcctctagcattttttgatttagaagctactggagttaat
gttggagctgacaggatcgttgaaatagcgattttaaaagccatgccagatggttccgaa
cttattaaaacctggcgggtaaatccggaaatgccaattcctttgcaaacttcgttaata
cacggtatttatgatgaagacattgctaatgagcctacctttaaaactttagcagtagaa
attgctgaatttatcggagatagtgatctggctggatacaattcaaacaaatttgatatc
ccaatgcttttagaagaatttttaagagcagaagttgattttgacatgaacagccgtaaa
tttgttgatgtacagaatatattccaccaaatggaacagcgtaccttaaaagcagcgtat
aagttctattgtcaggaagatttaattaatgcgcatgctgcagaagctgatgttattgcc
acttacaaggttttacttgggcagctggaaatgtacaaagaaactgagtttgagaataaa
caaggtgtaaaaagcattccagttgtaaatgacgtagatgcactgcatatcttcactaat
attaacaaaccagtagattttgctggtcgtttggtttacaatgatagcgatgaggtatgt
tttaactttggtaaacacaaaggtaaaactactgctcaggtattttcggtagaacctagc
tattatgcctggatgaaaaatggcgattttccattgtacacaaagaagaaattagacgag
gagtgggcaaagttcaatgcgaagaaaaatgagaacaaggcagcacgacctcaaaataac
acgcctgcaaataagcctcagtatcagcagaaacctcagccgaagccagaaaaacctgct
cagccgattaatacggatatgttggaacaattgaagatgaaatttggtaagtag
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