Pedobacter sp. KBS0701: FFJ24_008495
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Entry
FFJ24_008495 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_008495
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_008495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QDW24847
LinkDB
All DBs
Position
complement(2159357..2160916)
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AA seq
519 aa
AA seq
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MKIQYLFPLLIIMLTVTSCEKYLDVAPKDFTTPETYFLSAGDLDKALTGIYSQLNNRGVY
GRNLVFDLAFGSDEAFYKRSAAKIDPIVYNADGSNNTITTTWSSLYTGINSANLLLANIN
KPVMDETLRGRIKGEALFLRAFFYFQLVHNWGDVPLILTPTLSGLEVDHARTPQKEVYAQ
ILGDMITAEGLVGNIKDYGFSGRVSKTAVQGILARVCLKMAGAPLNDVSKFEEARKWSEM
VIKSGVHKLNPDYAQIFINHAQDKYDINENLWEVEVVGNGLSNPIYPGGGFAKKLSVRNT
SPQLYGYAEVGATAVLYRKYDDAHDVRKNRNIATYYFPVITSGNLADTLAFLPTDIYARD
TGKWRIQDEIAVQRNPDFGPTNFPLLRYADVLLMYAEAENEVNGPTKLAFDALNEVRTRA
KARNFTAVDAPNKDKFRAIIQDERSRELCYEALRKFDLIRWGIFINVMKDVENDILNNAP
TNLQYGATGYTNVKARNLLLPIPTLELSLNSLMRQNPGY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacaatatttattccctctgctcatcatcatgttaacggtaacatcctgtgaa
aaataccttgatgtagcacctaaagactttaccaccccagaaacctatttcttgtctgct
ggcgacctcgacaaggcacttacaggtatctatagccaacttaataacagaggtgtatat
ggtagaaacctggtttttgatttggcctttggcagcgatgaggcattttataaaagatca
gcagctaagatagatccgattgtttataatgccgatggttctaataacaccattaccact
acctggagttctttatatactggaattaactccgctaatttgttgttggctaatatcaat
aagcctgtaatggatgaaacgcttagagggagaattaaaggtgaagccttgtttttgcgc
gcattcttttatttccagttggtacacaattggggcgatgtaccattgatcctgacgcct
accctttccggattagaagtagatcatgcccgtacgccacaaaaagaggtatatgcccag
atcctgggcgatatgatcacggcagaaggtttggtaggtaacatcaaagattatggattt
tccggaagggtgagcaaaacagctgttcaaggcatcctggcaagagtttgcctaaaaatg
gccggcgcgcctttaaatgatgtgtcgaagtttgaggaggccagaaaatggtcggagatg
gttattaaatcgggtgtacacaaattaaatcctgattacgcgcaaattttcattaatcat
gcacaggataaatatgatattaacgagaatttatgggaggttgaagttgtaggaaatgga
ttgtcaaatccaatctatccgggtggtggttttgctaaaaagctatcggtgcgtaataca
tctcctcaattatatggctatgccgaagtgggtgcaactgcagtattgtaccgcaaatat
gatgatgcccatgatgttcgtaaaaatagaaatatcgcaacctattattttccggtaatc
actagtggcaatttagcagatactttagcatttctgccaacagatatctacgccagagat
accggaaagtggcggatccaggatgaaatagcggttcaaagaaatcccgatttcggacca
acaaactttccgctattgcgttatgccgatgtattgctaatgtacgctgaggctgaaaat
gaagtgaacggaccgaccaaattagcgtttgatgcattaaatgaagtaagaaccagggct
aaagcgagaaactttactgccgtagatgctcctaataaagataaatttcgcgcaataatc
caggatgaacgttccagagaactgtgctatgaagcacttcgcaaattcgatttgattaga
tggggaatatttatcaacgtgatgaaggatgtagaaaatgacatcctaaacaatgcgcct
accaatcttcagtatggtgcaacgggttacaccaatgtaaaagcccgtaatctgctattg
cctattccaacactagagttaagtttaaatagtttaatgagacaaaatccaggatattaa
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