KEGG   Pedobacter sp. KBS0701: FFJ24_008675
Entry
FFJ24_008675      CDS       T06361                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pek  Pedobacter sp. KBS0701
Pathway
pek03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pek00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FFJ24_008675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pek03400]
    FFJ24_008675
DNA repair and recombination proteins [BR:pek03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FFJ24_008675
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QDW24880
LinkDB
Position
2215166..2215936
AA seq 256 aa
MRSIWKGSIGFGLVNIPIKLFSGVQNSNLDLDMLDERDHAKIKFLRVNENTHKEVPYEKI
VKGYFLKDRYIVLDKHDFEEAAPEKTKIIELENFVDIKEINPIYYETSYYTEPEKQGKKA
YSLLLKALQKSGKAGVARFVLRNTENLCVIHPMENVIVITKIRFEQEIRSLSELNKVDDI
TITKKEMDVGLALIKQYSSKFDLSTFKDDYSTELLKIIKAKAKGKRATVKKMKPQKASSD
DLYDQLMQSLGSKKGA
NT seq 771 nt   +upstreamnt  +downstreamnt
atgagatcaatatggaaaggttcgattgggtttggtttggtaaatatcccgattaagttg
ttttcaggagtccagaacagtaatcttgatttagatatgctcgatgaacgcgatcatgca
aagattaaattccttagagtaaatgaaaatacacataaagaagttccttatgagaaaata
gttaaaggctattttttaaaagacaggtacatcgttttagataagcacgattttgaagag
gctgcacctgaaaaaactaaaattatagaattagagaattttgttgatataaaagagata
aatcctatttattacgaaacttcttattataccgagcctgaaaagcagggcaaaaaagct
tatagtttgttgttaaaagcattgcaaaaatctggtaaagctggcgtggccagatttgtt
ctcaggaatacagaaaatctctgtgttattcatcccatggaaaacgtaattgtaatcaca
aaaatcagattcgaacaggaaatcagaagcttatctgagcttaataaggttgatgatatt
accatcaccaaaaaagaaatggatgtgggattagctttgatcaaacaatatagctcaaaa
ttcgatttgagtacatttaaagatgattacagtaccgaattattgaaaattattaaagca
aaagctaaaggaaaacgagctactgtgaagaagatgaaacctcaaaaagcttccagtgat
gatttgtatgatcaactgatgcagagcttaggttcgaagaaaggagcgtag

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