Pedobacter sp. KBS0701: FFJ24_009190
Help
Entry
FFJ24_009190 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_009190
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_009190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QDW28187
LinkDB
All DBs
Position
2337692..2339614
Genome browser
AA seq
640 aa
AA seq
DB search
MKTYFTYGCIMVVLCTFISCKKYLDITPDNLGTLDYAFRNRNEAENYLYSCYAYLQRMND
AASNPGFTTSSELIYSNTLDNYLNFNRTGFNLLRGTQTAANPGLNAWDGSEGSYSLWRSI
RICNIMLENIDKPIDLGATEKQRWIAETKFLKAYYHYVLFKMYGPIPLIKTNLAINSSTD
EVRVKRAPVDETVDYIISLLDEAIPNLPPVISSQATELGRITSVIALSVKADVLATSASP
LFNGNPDYVSFKDKDGISLFPAAFDAQKWKKAADAAKAAITAAESQGIKLYTFSAPTTVG
KLSDSLKRELDVQNAVTEKWELNSEIIWASNPEFSYQGFATPRLTPKSAVNNFSNPSTFS
APISTQELFYTVNGVPISEDKTWDYAGRNAIKVGDNASRYYIRQGYETIKGHFARETRFY
ADIAFDGSIWFGNGRNNQDDPANPLYYVSARGTGLAAPSDNIRLNITGYWPKKLVSYASV
YDDGFQQSAFRLPLIRLAGLYLLYAEALNEVSGPSAEVFTYIDKVRQRAGLQGVQSSWTN
FSKSPNKFNSKDGLRQIIHQERRIELCFEGQSGWDLRRWKELQAVLTAPIQGWSINNAEA
INYYRPTTQFIPVFGLKDYLWPIRSYDLVVNPNLVQNPYW
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
ataaaaacatattttacatacggctgcatcatggtggtgttatgcacttttatatcctgc
aaaaagtaccttgatatcacacccgataatttgggcacacttgattatgctttcaggaac
agaaatgaagccgaaaactatttatactcgtgttatgcttatctgcagcgcatgaacgat
gcggcttcgaaccctggttttaccacttcatcggagctgatttattcgaacacacttgat
aattacctgaattttaatcgtacaggtttcaatctgttaaggggaacacaaacagcagca
aaccctggtttaaatgcgtgggatggcagcgaaggcagctatagcttgtggcgttcgatc
aggatctgtaatatcatgctcgaaaatattgataaaccgattgatttaggcgcaactgaa
aaacagcgctggattgccgaaaccaaatttttaaaagcttattatcactatgtgcttttt
aaaatgtacggaccaattccgttaattaaaaccaatctggccattaatagcagtaccgat
gaagtgcgtgtaaagagggcaccagttgatgaaactgttgattatattatttctctatta
gacgaagccatccctaatttacctcctgtaatcagcagtcaggctaccgaattaggcagg
ataacaagtgtaattgccttatcggttaaagctgatgttttggccacatcggccagcccg
ctttttaatggcaatcctgattatgtcagttttaaagataaagatgggataagtcttttt
ccggcagcttttgacgcacaaaaatggaaaaaagcagctgatgcagcaaaagccgccatt
acagctgcagaaagtcagggtataaaattatacacctttagtgcaccaacaacggtaggt
aagctatccgattcgttaaaaagagaattggatgtgcagaatgcagtaaccgagaaatgg
gagctgaattcggagatcatctgggcttccaatccggagtttagttaccagggttttgcc
acaccaaggcttacgccaaaatcggcagtgaacaatttttctaatccttctactttttct
gcaccgataagcacccaagagcttttttataccgtaaatggtgtgccgatcagtgaggat
aaaacctgggattatgcaggcagaaatgccattaaagtgggggataatgccagccgctat
tatattcggcaaggttacgaaaccataaaggggcattttgcacgcgaaacccgcttttat
gccgatattgcttttgatgggagtatctggttcgggaacggaagaaataaccaggacgat
ccggccaatccattatactatgtttccgcaaggggaaccggtcttgccgcgccgagtgat
aacatccgattgaacattacaggttattggccaaagaaactggtgagttatgcttctgtt
tacgatgatggttttcagcaatcggctttccgtttaccattgatcaggcttgcaggttta
tacctattatatgctgaagcattaaatgaggtaagcggacccagcgcagaagtatttact
tatatcgataaagttaggcaaagggctggcttgcagggtgtacagtcatcctggacaaac
ttttcgaaaagtccgaataaatttaattccaaagatggtttaaggcagatcatccaccag
gaaagaaggatcgaactgtgttttgaaggccagagcggttgggatttaagaaggtggaaa
gaacttcaggcggttttaaccgcaccgatacaaggttggagcatcaataatgctgaagcc
attaattattaccgtccaactacccaatttatcccggtttttggtttaaaagattattta
tggccaatcaggagttacgatttggtggtaaatccaaacttagttcaaaacccttattgg
tag
DBGET
integrated database retrieval system
