Pedobacter sp. KBS0701: FFJ24_009670
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Entry
FFJ24_009670 CDS
T06361
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pek03032
]
FFJ24_009670 (gyrA)
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_009670 (gyrA)
Enzymes [BR:
pek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FFJ24_009670 (gyrA)
DNA replication proteins [BR:
pek03032
]
Prokaryotic type
DNA Topoisomerases
FFJ24_009670 (gyrA)
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FFJ24_009670 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
QDW25062
LinkDB
All DBs
Position
complement(2452542..2455133)
Genome browser
AA seq
863 aa
AA seq
DB search
MAEDLENQQNDKIIQINIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLGL
GVTSGKPYKKSARIVGEVLGKYHPHGDASVYFTMVRMAQDWSLRYPMVDGQGNFGHIDGD
SPAAMRYTEARFSKLAEEMVADINKDTVDFQLNFDDTEQEPTVLPAKIPNLLVNGSSGIA
VGMATNMAPHNLTEVIDGVVNYIDNRDITIEELMKFVKAPDFPTGGIIYGYTGVKEAFET
GRGRIVMRAKAEIESIKDREVIIVTEIPYQVNKAQMIERTAELVGEKKLEGISNIKDESN
KDGIRIVYEIKRDANASIVLNNLYKYTALQTSFSVNNIALVKGRPQMLNLKDLIVHFVDH
RHDVIVRRTKYELAEAEKRAHILEGYLIALDHLDEVIKLIRASETPEEARLGLMEKFGLS
DLQARAILDMTLRRLTGLERDKIKEEYAELMKTIEYLKSILADEGLRMQIIKDELEEVKQ
KFGDERRTTIVHSAEDMSMEDFIDDEEVVITISHEGYVKRTPASEFKAQGRGGKGSKGST
SRNEDFIEHMLVATNHNYMLFFTEAGRCFWLRVYEIPEGSRTSKGRAIQNIINIPKEEKI
KAYIKVKNLKDQEYLENNFIIMCTKKGTIKKTSLEAYSRPRVNGINAININEGDILLEAC
LTNGESEIVMALRSGRAIRFNEKTVRPMGRTATGVRGVRLAHDQDEVVGMIAVNNPEVTV
LVVSEKGYGKRTDIEDYRVTNRGGKGVKTINVTEKTGQLVSIKDVTDSEDLMIINRSGIV
IRIPVSALRVMGRATQGVRLISLKGDDEIASVTKIDHEEDEEETVDLTDVVVTDGEEIEA
DTTPEADDTEEEGESDNETEEEN
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatttagaaaatcagcagaacgacaaaatcattcaaattaacatagaagag
cagatgaaatcggcctacattgattattcaatgtcggtaatcgtatcaagggctttgcct
gatgtacgcgatggattgaaaccagtacaccgccgtgtgctctacggcatgttggggtta
ggtgtaaccagcggaaaaccttataaaaaatcagcccgtatcgtgggtgaggttttaggt
aagtatcatccacacggcgatgcatccgtatattttaccatggttcgcatggctcaggat
tggagtttgcgctacccaatggtagatggacagggaaattttgggcacattgatggtgat
tcaccagctgcaatgcgttataccgaggcacgttttagcaaacttgctgaagaaatggtt
gcagatatcaataaagatacggttgattttcaattaaactttgatgatacagagcaggaa
cctacggttttacctgcaaaaatacctaaccttttagttaacggttcttccggaattgcg
gtaggtatggccaccaatatggcaccacacaatttaaccgaagtaattgatggtgtggtc
aactatatcgacaatagagatatcacaattgaggaattaatgaagtttgtaaaagctccg
gatttccctacaggtggtattatttatggttataccggtgtaaaagaagccttcgaaact
ggccgcggacgtattgtaatgcgtgcaaaagcagagatcgaaagcattaaagaccgtgaa
gtgattattgttactgaaattccgtaccaggtaaacaaagcccagatgattgaacgtact
gctgaattggtgggcgagaaaaaactggaaggcatttcaaacatcaaagacgaatccaac
aaagatggtatccgtattgtgtacgaaatcaaacgtgatgcaaatgcctctatcgtttta
aacaacctatataaatatacagcgctacaaacctctttcagtgtaaataacattgcattg
gtgaaaggccgtccacagatgttgaatcttaaagatttgattgtacactttgtggatcac
cgtcatgacgtaattgttcgccgtaccaaatacgaactagctgaggctgaaaaacgtgcg
cacatattagaaggttatctaattgctttagaccatttagatgaagttattaaattgatc
cgtgcatccgaaacgccagaagaagcccgtttaggcttaatggagaaattcgggctgagc
gaccttcaggcacgtgcgatcctggatatgacattgcgtcgtttaacaggactagagcgc
gataagattaaagaagaatatgctgaattaatgaaaaccatcgaatacttgaaatctatt
ttagcagatgaaggtttgcggatgcagattatcaaggatgaactggaagaggtgaagcag
aaatttggtgatgaacgcagaactacaatcgttcactcggcagaagatatgagtatggaa
gatttcatcgacgatgaagaagttgtgatcaccatttctcacgaaggttacgtaaagcgt
actccggcaagcgaatttaaagcacagggcaggggtggtaaaggttctaaaggcagtacc
tcaagaaatgaagattttattgagcacatgctggtagccaccaaccacaattacatgttg
ttctttactgaagccggaaggtgtttctggctgagggtatacgaaattccggaaggttcg
agaaccagtaaaggaagagcgatccagaacatcatcaatattccgaaagaagaaaaaatc
aaagcttatatcaaggttaaaaaccttaaagaccaggaatacttagagaacaatttcatc
attatgtgtactaaaaaaggtaccattaagaaaacatctctcgaagcatattcacgtcca
cgtgtaaatggtatcaacgccattaacattaacgaaggcgatatcttattagaagcttgt
ttaaccaacggcgaaagcgaaattgtaatggctttacgttcaggaagagccatccgtttc
aatgagaaaactgttcgtccgatgggtagaacagctaccggtgttcgtggtgtaaggctt
gcacacgatcaggatgaagttgttggcatgattgctgtaaacaatcctgaagttacggtg
ttagtagtatcagaaaaaggttacggaaaacgtaccgatattgaagactatcgtgtaact
aaccgtggtggtaaaggggtaaaaacaattaacgttactgaaaaaaccgggcaattagtt
tctataaaagacgttactgatagcgaagatttgatgattattaaccgttcaggcattgta
atcagaattccggtatcagcattaagggtaatggggcgtgccacacaaggggttcgttta
atatcgttaaaaggtgatgacgaaattgcatcggttaccaaaattgaccacgaagaagat
gaagaagaaacagtagatttaacagatgttgtagttacagacggtgaagaaatagaagcc
gatactactcctgaagctgatgatactgaagaagaaggagaatcagataacgaaaccgaa
gaagaaaattaa
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