Pedobacter sp. KBS0701: FFJ24_009810
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Entry
FFJ24_009810 CDS
T06361
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pek03016
]
FFJ24_009810 (mnmE)
Transfer RNA biogenesis [BR:
pek03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
FFJ24_009810 (mnmE)
Prokaryotic type
Methyltransferases
FFJ24_009810 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
cobW
GTP_EFTU
MMR_HSR1_Xtn
Dynamin_N
Ras
AAA_22
ATP_bind_1
Arf
AAA_18
Guanylate_kin
AAA_14
AAA_16
AAA_15
Roc
ABC_tran
ABC_ATPase
SRPRB
nSTAND3
AIG1
AAA_24
GCV_T
AAA_25
ATPase_2
AAA_29
TPR_NUP160_120_M
Motif
Other DBs
NCBI-ProteinID:
QDW25087
LinkDB
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Position
2487123..2488481
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AA seq
452 aa
AA seq
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MNNQDTIIALSTPSGSGAIGVIRLSGPEAISLTNAVFAGKDLEKQASHTLHFGLVKDGDH
IVDEVVAGLFVAPKSYTKENVVEISCHGSNYIIQQIINLLISKGARAAKPGEFTLRAFLN
GAFDLSQAEAVADLIASNSKASHDVAMQQMRGGFANELKGLREQLIHFASMIELELDFAE
EDVEFANREQLKNLVNKINYVLQRLISSFEMGNVIKNGVPIVIAGKPNVGKSTLLNALLN
EERAIVSDIAGTTRDTIEDELTIGGIVFRFIDTAGIRDTADIIEALGVERTLEKMKQAKL
IIYMADAAQSISEIEEQIRGLAQLAIPYLILVNKADLLADAQRKAFEALNVVFISAKEKQ
GIDELKTTLLEQVNLHHINTSETLVTNIRHVEALKQTEHALQRVLANVDNPVTSDFLAMD
IKQALHYLGEITGTVTTDDLLENIFTKFCIGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaagataccattattgctttatctactccttcaggttcaggcgccattggc
gttatccgtttatctggtccggaggccatttcacttaccaatgccgtatttgcagggaaa
gatttagaaaagcaggcctcgcataccttacattttggcctggttaaagatggcgatcat
attgtagatgaagtggtggcaggtttatttgttgcgccgaaatcgtataccaaagaaaac
gtggtagaaatttcctgccatggctctaactacattatccaacagattattaacctgtta
atcagcaaaggtgcccgtgctgccaaacctggcgaatttactttgcgcgcttttttaaac
ggagcttttgatctgagccaggcagaagcagttgccgatttaattgcttccaactccaaa
gcttcgcatgatgtggccatgcaacagatgcgcggtggcttcgccaacgaattaaagggt
ttacgcgaacaactgatccattttgcttccatgatcgagctcgaactcgattttgccgaa
gaggatgtagagtttgccaaccgcgaacagctaaaaaacctggtgaacaaaatcaattac
gttttacaacgtttaatctcctctttcgaaatgggaaatgtgattaaaaatggggtgccc
attgttattgcaggtaaacctaatgtgggtaaatcaaccctgttaaatgccctcctgaac
gaagaacgcgctatagtttctgatattgccggcaccacacgcgataccattgaagacgaa
ctcaccattggcggcattgttttccgttttattgatactgccggaatccgcgataccgca
gatattattgaagctttaggggtagaacgcacactagagaaaatgaaacaggccaaactg
atcatttatatggccgatgccgctcaaagtatttcagaaattgaagaacagatcagggga
ttggcacagttggctatcccctacttaattttagtcaataaagccgacctcctggctgat
gcacaacgtaaagctttcgaagctttaaatgttgtttttatctctgccaaagagaaacag
ggcatcgatgaattaaaaaccactttactggagcaggttaacttgcatcacattaacacc
agcgaaaccctggtgactaatatccgccatgtagaagcgttaaaacaaaccgaacatgcg
ctgcaaagggttttggccaatgtagataatccggttacctccgattttttagccatggac
attaaacaggcgctgcattatctgggtgagataaccggtacagtaactaccgatgatttg
ctggagaatatatttacgaagttctgtatcggcaaataa
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