Pedobacter sp. KBS0701: FFJ24_010595
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Entry
FFJ24_010595 CDS
T06361
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_010595
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FFJ24_010595
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Omp85
Motif
Other DBs
NCBI-ProteinID:
QDW25235
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All DBs
Position
complement(2655042..2655494)
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AA seq
150 aa
AA seq
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MADVHSKETRSYNMSRIKSRNTKPEVLLRKALWSNGIRFRIHVKNMPGKPDIVINKHRLA
IFVDGGFWHGYQWEKKRSKIKSNADFWIKKIESNMRRDMINQRRLQEVGYTVMRFWDHDV
TKNLNKCINQILLFLEASKDQTIPSRNLFI
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttcacagcaaagaaacccgctcttataacatgagccgcattaagagcaga
aataccaagcccgaagtgcttcttagaaaagcattatggtctaatggaatccgctttcgg
atacatgttaaaaacatgccgggaaaacctgatatagtgattaataaacaccgcctcgct
atatttgttgatggtggcttttggcatgggtatcaatgggaaaagaaaagatcaaaaata
aaaagcaatgccgacttctggattaagaaaattgaaagcaatatgcggcgcgacatgatc
aaccaaaggaggcttcaagaggttgggtatacggtaatgcgattttgggatcatgacgta
actaaaaatctgaataaatgtattaatcaaattttactttttctcgaagcctcgaaggat
caaacaatacctagcagaaacttatttatttaa
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