KEGG   Pedobacter sp. KBS0701: FFJ24_011085
Entry
FFJ24_011085      CDS       T06361                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pek  Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:pek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pek03400]
    FFJ24_011085
Enzymes [BR:pek01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FFJ24_011085
    5.6.2.6  RNA 3'-5' helicase
     FFJ24_011085
DNA repair and recombination proteins [BR:pek03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FFJ24_011085
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DUF1192 KRIT1_FRMD8_FERM_C
Other DBs
NCBI-ProteinID: QDW25325
LinkDB
Position
2762936..2765413
AA seq 825 aa
MDQTKTKGYKKIKSWLKANKRRPFQFQEDAWQYYLNGYSGLVNAPTGFGKTFSLFLAVVI
EALNASEASNKKAKDRLQLIWITPLRSLAKDIARAMRETLLELELDWHVGVRNGDTSQAE
KVQQKKSMPEILLITPESLHLLLAQKGSSPLFRNLKCIVADEWHELLGSKRGVLVEVAVS
RIKGLQRLEKNQFLRIWGISATIGNIDEALDVLEPNLEAKRIIVKADLEKKIVIKSIIPD
DIETLPWAGHLGLKLAYKLLPIIEKSKTTLIFINTRGQSEMWYQHLLNIEPELAGRIAIH
HGSIDFELRNWIEDALHTGKLKAVIATSSLDLGVDFKPVDTVVQVGSPKGVARFLQRAGR
SGHSPHETSKIYFLPTHALELVEAAAIKEAAKTNNIESREPFIMVFDTLVQYLVTLAIGD
GFDDKIIYEEIKNTHAFKLILPEEWTWVMQFITSGGDSLSAYTEFKKVIKDEDGLWKVKS
RQLAMRHRLHIGTIVSDAMLKVKFISGGYIGMVEEYFVTRLKAGDNFRLAGRVLEFIQVK
DMTVVVRVSKQKNAISPSWNGGRLPLSSNLGSVLRKKYNEALDKTHQDEELDSVYPLFLL
QEKRSHVPRNDELLIELINNKEGFHLFAYPFEGRLVHEVLAALVAYRLSKLLPISFSIAM
NDYGFELLSETEIPMDESIAYEVFSPKNLTEDITLSINSTEMARRKFRDIACISGLVFQG
YPGKYVANKHLQSSAGLFFNVFSDYDKHNLLLRQAYDEVFYQQLEEPRLAAALERIQNGA
VIITNPKSFTPLSFPIKVDSLRENMSSEELEQRIARMKAESEKIK
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggaccaaaccaaaaccaaaggctataaaaagataaaatcctggctaaaggcgaataaa
cgcaggccttttcaatttcaggaagatgcctggcaatattatcttaatggctacagcggt
ttggtaaacgcacctacaggcttcggaaaaaccttttcgttatttttagcggtggtaatt
gaggctttaaatgcatcagaagccagtaacaaaaaagcaaaagatcgcttacagttgatc
tggattaccccactccgctccctggccaaagatattgcgagagccatgcgtgaaacttta
ttagaactagaactggattggcatgtaggtgtacgcaatggcgatacctcgcaggcagaa
aaagtacagcagaaaaaatcgatgcctgaaattttattgattacccctgaaagcctgcac
ctgttgctggcacaaaagggttcttcacccctgttccggaatcttaaatgcattgtggct
gatgaatggcatgaacttttgggcagtaaacgtggggtattggtagaggtagccgtttcg
cggattaaaggtttgcaaagattagaaaaaaaccagttcttaaggatttgggggatttcg
gcgaccataggcaatatagatgaggctttagatgtattggaacccaatttagaagctaaa
cgcatcattgttaaagccgatctggaaaagaaaatcgtaattaaatctattatacccgac
gatattgaaacactgccctgggcagggcacttgggcttaaaattggcttataaacttttg
ccgatcatcgaaaaaagtaaaaccaccttaatttttatcaatacccgtggacaatcggaa
atgtggtaccagcatttgctgaatatagaaccagaactggcaggacgaatcgccatacac
catggatcgatagatttcgagttgcgtaactggattgaagatgccctgcataccgggaaa
ctcaaagcagttattgcaacttcttctctagatttaggcgtagactttaaacccgttgat
acggttgttcaggtaggttcgccaaagggagtagcccgttttttgcaaagggcggggcgc
tctggtcactcgccgcacgaaacttcaaaaatctatttcctacccacccatgcacttgaa
ctggtagaagcagcagccattaaagaagcggctaaaacaaacaatatagaaagcagagag
ccttttattatggtgtttgatacattggtgcagtacctggttacattggctataggcgac
ggatttgatgataaaattatttacgaagaaattaaaaatacccacgctttcaaacttatc
ctccctgaagaatggacctgggtaatgcagtttattacctctggaggagatagcttaagt
gcctataccgaatttaaaaaggtaattaaggatgaagatgggctttggaaagtgaagagc
aggcaactggccatgcggcaccgtttgcacattggtactattgtgagtgatgcgatgctt
aaggttaaattcatttcaggtggatacattggtatggtggaagaatattttgttacccgt
ttaaaagccggcgataatttccgtttggcagggcgggttttagaatttatccaggtaaaa
gacatgacggttgtagtaagggtaagcaagcaaaaaaatgccatttcgccaagctggaac
ggtggacgcctacccttatcatccaatttgggttcagtattacgtaaaaaatataatgaa
gctttagataaaacccatcaggatgaggaactggattctgtttacccattgttcctattg
caggagaaaagatctcatgtacctagaaatgatgagttattgatcgaactgatcaataat
aaagaaggctttcatttatttgcctatccctttgaaggacgtttggtacacgaggttttg
gcggcattggtcgcctatcgtttaagtaaactgcttcccatcagtttttctattgccatg
aacgattatggtttcgaactgttaagtgaaacagaaatccctatggatgaatcgattgcc
tacgaagttttctctcctaaaaatttaaccgaagatataacgctaagtattaactccact
gaaatggccagacgaaaatttagggatattgcctgtatttcaggactagtttttcagggt
tacccgggaaaatacgtggcgaacaaacatctccagtcatcggcgggtttgttttttaat
gtttttagcgattacgataaacataatttacttttgcggcaggcttatgatgaagttttt
tatcagcaactggaagaacccaggttagcagccgctttagaaaggattcagaatggagcg
gttatcatcaccaatccgaaaagttttacgccactatcttttccaatcaaagtagacagt
ttgcgtgagaatatgagttcagaagaattggagcagcggattgccagaatgaaggccgaa
tctgaaaaaattaaataa

DBGET integrated database retrieval system