Pedobacter sp. KBS0701: FFJ24_011865
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Entry
FFJ24_011865 CDS
T06361
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFJ24_011865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_011865
Enzymes [BR:
pek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FFJ24_011865
DNA repair and recombination proteins [BR:
pek03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFJ24_011865
Prokaryotic type
FFJ24_011865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AD
Motif
Other DBs
NCBI-ProteinID:
QDW25472
LinkDB
All DBs
Position
2935860..2936540
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AA seq
226 aa
AA seq
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MSAALEPGWLAVLEEEFEKDYMKSLKAFLQEEKQKGATVYPKGADIFNALNTTPFDQVKV
VILGQDPYHGVGQAHGLSFSVQRGVAVPPSLKNIYKELETDIEGFKTPNHGHLTHWAEQG
VLLLNATLTVRASEAGSHQNRGWEIFTDEIIKALSQKREHIVFLLWGKYAQQKAALIDQK
KHYMLTAAHPSPFSAYNGFFGSKHFSKANQLLVQNNLTPIDWNLPA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcattagaacccggttggttagccgttttagaagaagagtttgaaaaagac
tatatgaaaagccttaaagcctttttacaggaggagaaacagaaaggtgcaacggtttat
cctaaaggcgctgatatttttaatgcattaaatacaacgccatttgatcaggtaaaggtt
gtcattttaggtcaggatccttatcatggcgttggccaggcacatggattatcgttttcg
gtacaacgcggtgtagcggttccgccctcattaaaaaatatttacaaagagctggaaact
gatatcgagggctttaaaacaccaaatcatggccacttaacccattgggctgaacaaggt
gtattattgctcaatgctacactaacagtccgtgcttcggaggctggttcacaccaaaac
cgcggatgggaaatttttacagatgaaattataaaggctttatctcaaaaacgcgaacat
attgttttcttgttatggggtaaatatgcacagcaaaaagcagctttaatagatcaaaag
aaacattatatgcttactgctgcccacccatctccattttcggcctacaatggcttcttt
ggatcaaaacatttttcaaaagcaaatcagcttctggtacagaataatttaacaccaatc
gactggaacttaccagcctaa
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