Pedobacter sp. KBS0701: FFJ24_012235
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Entry
FFJ24_012235 CDS
T06361
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_012235 (dinB)
Enzymes [BR:
pek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFJ24_012235 (dinB)
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
FFJ24_012235 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
FliD_C
Motif
Other DBs
NCBI-ProteinID:
QDW25537
LinkDB
All DBs
Position
complement(3022737..3024047)
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AA seq
436 aa
AA seq
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MDKERQIIHMDQDAFFVSVEIRKNPKLLGKPVIIGGGGDRGVVASCSYEARKYGIHSAMP
GRTAKLLCPQAIFLKGDMEEYSRASHEITEIITDKVPLFEKASIDEHYIDMTGMDRFFGC
MKFASELRQTIIKEMKLPISFGLSINKTVAKIATNESKPGGERQVTFPELRPFLDPLAIH
KIPGIGHATYKKLSEMGVREILTLTQIPQQLMFKILGQHGLSLWQKANGIDLSPVVPYRE
RKSIGTQATFESDTMDMAKLKAIITGMVSGLTFQLRNQKKLTACITVTVRYTNFETVTQQ
ERIPYTSLDSFLISKAHSLFEKVYSKRMLLRLVGVKLSHLVSGYEQIGLYDVAEEEYSLY
QAMDKVRNSYGAEAVVKACIVTQPPRDEKGKIIKYNPRKKKILIENQAEEEPEIKKRSKI
RSFMSEKGITGSKSYE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaaaggcagattattcatatggatcaggatgcattttttgtatcggtagaa
atcagaaaaaatcccaaattgctgggtaaacccgtaattattgggggtggtggcgatagg
ggcgtggtggcctcttgcagttacgaagcccgtaaatatggtattcactccgccatgccg
ggccgtaccgcaaaattgctctgcccccaggctatatttttaaaaggtgatatggaagaa
tattccagggcatcgcacgagattaccgaaatcatcaccgataaagttcctcttttcgag
aaagcgagtatcgacgaacattatatcgatatgacgggcatggaccgcttttttggttgt
atgaaattcgcgtcagaactccggcaaactattattaaagaaatgaaattgcctatttcc
ttcggcctgtcgatcaataaaaccgtagccaaaatagccacgaacgaatctaaacctggt
ggcgaacggcaggttacttttcctgagttgcggccctttctcgatcctttggctattcat
aaaattccgggtattggtcatgctacttataaaaaactaagcgaaatgggggttcgcgaa
atccttacgcttacgcagataccacaacagctcatgtttaaaattttgggacagcatggt
ttaagtttatggcaaaaagcaaacgggatcgacctttcgcctgtggtaccttaccgcgaa
agaaaatcaattggtacacaggccactttcgaaagtgataccatggatatggctaaatta
aaggctattataaccggaatggttagcggactaacctttcagttgcgtaatcagaaaaaa
ctaactgcctgtattactgtaaccgtgcgttacaccaatttcgaaaccgttacccagcag
gagcggattccttatacctcgctcgattcatttctgattagcaaagcacatagcctgttc
gaaaaggtatattcaaaacggatgctgctgcgcctggtgggtgtaaaactttcgcacctg
gtgagtggttacgaacagattggtttatatgatgtcgccgaagaagagtatagtctttac
caggccatggataaggtgcgtaacagctatggtgccgaagcggtagtaaaagcctgtatt
gttacccaaccaccacgcgatgaaaaaggaaaaataattaaatacaatccccgtaaaaag
aaaattttaatcgaaaaccaagcagaagaagagccggaaataaagaaacgttcgaaaatc
agaagttttatgagtgaaaaaggaataacaggttccaaatcttacgagtag
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