Pedobacter sp. KBS0701: FFJ24_012320
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Entry
FFJ24_012320 CDS
T06361
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pek01002
]
FFJ24_012320
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
FFJ24_012320
Peptidases and inhibitors [BR:
pek01002
]
Cysteine peptidases
Family C40
FFJ24_012320
Peptidoglycan biosynthesis and degradation proteins [BR:
pek01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
FFJ24_012320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
QDW25554
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Position
3044220..3045743
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AA seq
507 aa
AA seq
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MHKIYLSAVVLFALNIANARANTARDSIGVENNKGKKLIVHQTVAKDTYYSIGRRYNVSP
KDIMAFNENKYLQVGVIIKVPTNIPFTASGSPNAETTSSTASVIEHTIKPKENLNMLAEK
YGTTINEIKALNNLKSSNLSIGQVLKIPAKNGTQTAAAEPVTAPVKNNTELPVNNSPASD
QTMIEHTVAPKEFLGKIAEKYGTTVEEVKKANNLSGNNLRIGQKLKIPATKNIDENKVVS
AAVEEKPAQENKSSDTAGTHTVLRNETIFTIAKQYGITAYQIRTMNNLPDNAITIGQVLK
VPGGIVADVQVPKEKQAETKTKEVPVANKEESFIHTVATGENIFSIAKKYNLTAFQIRTA
NKLDDNNIKVDQKLIIPKPPQPKSVNDISKEEQENEPDSTMVKDPKLRRDPSVYGLSQIE
EKGTAVWIADQDLDGTKMLVLHRTAPVGRVIKITNPMTNRTTFAKVVGKFTENESTKDVI
IVMTKAVADSLGALDKRFFCNLTYSAQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaatatatttatctgctgtagtgttatttgcgctgaatattgcaaatgccagg
gccaacacagcaagagactctatcggtgtagaaaataacaaaggcaaaaaactgatcgtt
caccaaaccgtagcaaaagacacttattattctatcggaagaagatacaatgtatcaccc
aaggatatcatggcttttaacgagaacaaatacttacaggtcggggtaatcatcaaagtc
cctacaaatattccttttacagctagtggatcaccaaatgcagaaacaacttcttcaacg
gccagtgtgatagaacacaccattaagccgaaagaaaatttgaacatgctggccgaaaaa
tatggtactacaataaatgaaattaaggctttaaataatttaaagagcagtaatttaagc
atcggacaggtgttaaaaattccggcgaaaaacggcacacagactgcagcagctgagcca
gttacagcaccagtaaaaaacaatacagaattacctgtaaacaatagcccggcttcagat
caaaccatgatcgagcataccgttgcacctaaagagtttttaggaaaaattgccgagaaa
tacggcactacggttgaagaagtaaaaaaagcgaataacctttcaggcaataacctccgt
attggtcagaaactgaaaatcccggcaacaaaaaacatcgacgaaaataaagtagtttcg
gctgctgttgaagaaaagccggcacaagagaataaatccagtgatacagcaggtacgcat
accgttttaaggaacgaaaccatattcactattgccaagcaatatggcattaccgcttat
cagatcagaacgatgaacaatctccctgataacgccattaccatcggacaggttttaaaa
gttccgggcggcattgttgccgatgttcaggtaccaaaagaaaagcaggctgaaaccaaa
acaaaagaagtaccggtagcaaacaaagaagaaagttttatccatactgtagcaactggc
gaaaacattttctctattgctaaaaaatacaatttaacagcctttcagatcagaacagca
aataaactggatgataacaatattaaggtagaccaaaaactgattatcccgaaaccacca
caaccaaaatcggtaaatgatatttcaaaagaggagcaggaaaatgaaccggacagcacc
atggttaaagatcctaaactgcgccgcgacccaagtgtttatggcttaagccagatcgaa
gaaaaaggtaccgcggtttggattgctgatcaggacctggatggcacaaaaatgttggtt
ttacaccgtacagcacctgttggcagggtaatcaaaatcaccaatccaatgaccaaccgc
actacctttgctaaagttgttggtaaatttacagagaacgaatctacaaaagatgttatc
attgtaatgactaaagctgtagccgattcattgggtgctttagacaaacgttttttctgc
aatttaacctatagtgctcaatga
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