Pedobacter sp. KBS0701: FFJ24_012345
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Entry
FFJ24_012345 CDS
T06361
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FFJ24_012345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_012345
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FFJ24_012345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Atg11_middle
Motif
Other DBs
NCBI-ProteinID:
QDW25559
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Position
complement(3049625..3052003)
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AA seq
792 aa
AA seq
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MLYPENCLERLGFVEIRQLISKHCLSPMGQTMVEKMQVMNRFDQIDKFLRQTNEFKSILQ
NQEPLQINTFFDIKSLVEKIRVEGTYLLEDEWFQVYTSLQTVFSVLRFFEERAEVYPTLE
ALFEHLPIEKNILRKIETVIDAKGKIKPNASKELQEITSAISKAEQDVRKRMDSIYKQAI
ANNWVADGSLTIRDGRMCIPVLAENKRKLKGFVHDESATGQTVYIEPEEVFTLNNKLRDL
EFDKRREIIKILIALTDDLRPYSPLLLSYHGFLTKLDFVRAKALFALDIEAEMPGLLKEP
KTRLINARHPLLSISFAAEKKSVTPLNIHIDAETRVVLVSGPNAGGKSVCMKTVGLLQIM
LQTGLLIPVDTNSEVGIFENIFADIGDDQSIESDLSTYSAHLKKMRYFVEHASPKTMVLI
DEFGTGTDPQFGGPMAEAVLEVLNNKKVRGVITTHYSNLKLFAGNTPGLENASMLFDNAK
MKPLYILEMGKPGSSYAFEIAQNIGLPKEVIQLAKEKTGSNQNRVDTMLVDLEREKKNVY
DAKVSLANQQNKAKNLVAENEKLKTFLEENKKILIKEAKQEAQNIIKNANKLVENTIAEI
KEKQADKEVTKGLRQNLQRELAKNTIPKERPKPAPVVVGGEIGVGDLVKFTDSETIGQVL
EINRNELVLAIGDLRSTVKKNRVQKVSNREAKKVIQSGAHSFAGRMNEAVSDFRAELDLR
GKRTEDALFEVEKYLDKAIMLGFPSIKLIHGKGDGILRKMIREYLRKYSQVNRMEDEHAD
RGGDGITYVYLN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgttatatcccgaaaattgtttagaacgtttaggttttgtggaaatcaggcaactgatc
agcaagcattgtttgagccccatggggcaaacgatggtggaaaagatgcaagtgatgaac
cgttttgatcaaattgataaatttttacgtcaaacaaacgagttcaagagcatcctgcag
aatcaggaacccttacagatcaataccttttttgatatcaaatcgctggttgaaaaaatc
agggtagaaggaacttatcttttagaggatgagtggttccaggtatatacttccttacag
accgttttttcggtgcttcgcttttttgaagaaagggcggaggtttatccaacgctcgaa
gctttatttgagcatttaccaatcgaaaaaaacattctgcgtaaaatagaaacggtgatt
gatgccaaaggaaagattaaacccaatgcatcaaaagaattgcaggagattacttcggct
atttctaaagcggagcaagatgttcgaaagcgtatggattcgatctacaaacaggctata
gccaataattgggttgccgatggtagcttaactattcgtgatggcaggatgtgtatcccg
gtattggccgagaataagcgcaaacttaaaggttttgtgcatgatgaatcagccacaggg
caaaccgtttatattgagccagaagaggtttttaccttaaacaacaaactgcgcgattta
gaatttgacaaacgtcgcgaaatcatcaagattttaattgctttaacagacgatcttcgt
ccgtattcgccattattactttcttaccatggcttccttactaaattggattttgtgcgt
gcaaaagcattgtttgctttagatattgaagccgaaatgcccggtttattaaaggagccg
aaaaccaggctaatcaatgccaggcatcccttgttatccatctctttcgcagctgaaaag
aaaagcgttaccccattaaatatccatatcgatgctgaaacgcgtgtggtcctggtttca
ggaccaaatgcaggtggtaaatcggtttgcatgaaaacggttggtttactgcagattatg
ttgcaaacaggtttgttgatacccgttgatacaaacagtgaagtgggtatttttgagaat
atttttgccgatatcggcgacgatcaatcgatagaaagtgatttaagtacttacagtgca
cacctgaagaagatgcgttattttgtagagcatgcttcgccaaaaacaatggtgctgatt
gatgagtttggtacaggtaccgatccacagtttggcggaccaatggcagaggctgtttta
gaggtgttgaacaataaaaaagtgagaggtgtaattaccacccactattctaacttaaag
ttgtttgcagggaatacacctggtttggaaaatgcatcaatgctttttgataatgcaaag
atgaaaccgctttacattttagaaatgggcaaacccggaagttcttatgctttcgaaatt
gcacagaatattggtttgccaaaagaagtgatccagttggccaaagagaaaacaggatct
aaccagaaccgggtagatacaatgttggttgatctggaacgtgaaaagaaaaatgtttat
gatgcgaaagtaagtttggccaatcagcagaataaggccaaaaacctggttgccgaaaat
gaaaagttaaaaacatttttagaagagaataaaaaaatcctgattaaagaagcgaagcaa
gaggcgcaaaatattattaaaaatgccaataaactggtagaaaataccattgccgagatt
aaggaaaaacaggccgataaagaagttactaaagggctccgccagaatttgcagcgcgaa
ctcgctaaaaatactataccaaaagagcgtcctaagccggcaccagtagttgtagggggt
gaaattggagtgggcgatctggttaaatttacagatagcgaaactattggtcaggttttg
gaaattaaccggaatgaactggttttagccattggcgatttacgttcgacagtgaagaaa
aaccgtgtacaaaaggtaagtaaccgggaagctaaaaaagtgattcagagcggtgcacac
tcgtttgccggacgtatgaatgaagcagtatcggactttagggctgaattggacctgcgc
ggaaaacgcacggaagatgccttatttgaagttgaaaaatacctggataaagccattatg
cttggttttccttctattaaactaatacatggtaaaggtgatgggattttgaggaaaatg
attagggagtatttacggaaatatagccaggtgaatagaatggaagatgagcatgcagat
agaggtggagatgggattacgtatgtatatttgaattga
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