Pedobacter sp. KBS0701: FFJ24_012445
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Entry
FFJ24_012445 CDS
T06361
Name
(GenBank) PAS domain S-box protein
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FFJ24_012445
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pek01001
]
FFJ24_012445
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pek02022
]
FFJ24_012445
Enzymes [BR:
pek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
FFJ24_012445
Protein kinases [BR:
pek01001
]
Histidine kinases
OmpR family
FFJ24_012445
Two-component system [BR:
pek02022
]
OmpR family
VicK-VicR (cell wall metabolism)
FFJ24_012445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_4
PAS_9
PAS_3
PAS_8
PAS
HATPase_c_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QDW25579
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Position
3069273..3071126
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AA seq
617 aa
AA seq
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MIDLASPFLKALLKHSISPIVIFKIKPILVVVAHNDAYQALIERVGGKSKLNNIDIIPNL
VSDAEKNILIKTVQNVCELKEKSTLIIHPIYSNSPNVKWELEFSPVLQNDRPVEYLVCSL
REIPMDENDLEHILFELAESEARFRGFFEQAPLGMCVLKGPELITEYANDNILKLWGKYR
KEVIGLPLEEARPEFEKQEALVKRVKDIFKNEQPLTLNELKLSTPVSDGYFIAFYEPLKN
DKNEVTRILVIIKDITEQVNFKKELLKAKDILKIAMDASEMGSWNIDLENKQILLSERAQ
HIYELENNRLGIEEAKSLISPEDIRHLTGGIKHALHHRSAFNIEYQINLNGVSEKHKWLR
TAGKAYYNEEGKAVYIAGAVLDITEHKQDEIRKNDFIGMVSHELKTPLTSLSAYVQLLQY
KFKETDNNFPNQILDKINIQLKRMSLMIDGFLNVSLLESGKISLNKTNFNLIDLIKTIAE
ENRMVLPSHFIQVVGPEEMILHADMEKIGNVINNLIGNAAKYSKKESLIAIKCEIQKGYI
VVSVEDEGIGIREDDIPRLFDRFYRVESSDTKTIAGFGVGLYICAEIIKRHKGEIWAESK
LGEGSTFYFSLPIPTDQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttagcttctccattcttaaaagcactattaaaacattctataagtcctata
gtcatttttaaaataaagccgatattggtggttgtagcacataacgatgcttaccaggct
ttaattgagcgcgtgggtggaaaatcaaaattaaataatatagacattatcccaaacctc
gtatctgatgctgaaaaaaacattctaattaaaacagttcagaacgtttgtgaacttaag
gaaaaaagtacgctgattattcatcccatctattccaactcaccgaacgtgaagtgggaa
ttggaattttcgccagtgttacaaaatgaccgcccggttgaatacctcgtttgttcgtta
agggaaattccaatggatgaaaatgaccttgagcatattttatttgaacttgcagaaagt
gaagcacgttttaggggattttttgagcaggcacctttaggcatgtgtgtattaaaaggt
ccggaactgattacggagtatgcaaacgataatatattaaaactttggggtaaatacaga
aaagaagttatcggattacctttggaagaggcacgaccggaatttgaaaaacaggaggca
cttgttaaacgtgtaaaagatatcttcaaaaacgaacagccattaacactcaacgaatta
aaactctccacaccagtttcggacggttatttcatcgctttttatgaacctttaaaaaat
gataaaaacgaagtaacgagaattttagtgattattaaagatattacagaacaggtaaac
tttaaaaaagaactgcttaaggcaaaagatattttaaaaatagccatggatgcatcagaa
atgggctcgtggaatatcgacttggaaaataaacaaattcttctatcagaaagggcacag
catatttatgaactggagaataacagattgggcattgaggaagccaaatcgttaatcagc
cctgaagatatcaggcatcttactggtggcattaaacatgcattacaccatcgaagcgct
tttaacatcgaatatcagatcaatttgaatggcgtcagtgaaaagcacaaatggttaaga
actgctggaaaagcctattataatgaggagggaaaagctgtttatattgccggagctgtt
ctggatattacagaacataagcaggatgaaattagaaaaaatgattttatcgggatggta
agtcacgagctgaaaacccctctaacctctttaagtgcctacgtacagcttttacaatat
aagtttaaagaaacagataacaactttcccaatcagatactggataagataaatattcaa
ttaaaaagaatgtcattaatgattgatggctttttaaacgtatccttactggaatctggt
aaaatttcattaaacaaaacaaattttaaccttattgatttaattaaaaccattgctgaa
gaaaacagaatggttctacccagccattttatccaggtagttggtccggaagaaatgatt
ctacatgctgatatggaaaaaattggcaatgtaattaataacctgattggcaacgcagca
aaatactcgaaaaaagaatctctaattgcaataaaatgcgaaatacaaaaaggttatata
gttgtaagtgtagaagacgaaggtataggtatcagagaagatgatataccccgacttttt
gaccgtttttatcgcgttgaaagttcagatactaaaacaattgcaggatttggtgttggc
ctgtacatttgtgccgagataattaaaaggcacaagggagaaatttgggcagaaagtaaa
ttaggagaaggttctacattttatttcagcttgcccatcccaactgaccagtaa
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