Pedobacter sp. KBS0701: FFJ24_013285
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Entry
FFJ24_013285 CDS
T06361
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pek03110
]
FFJ24_013285 (clpB)
Chaperones and folding catalysts [BR:
pek03110
]
Heat shock proteins
HSP100
FFJ24_013285 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
NACHT
IstB_IS21
AAA_14
Mg_chelatase
RuvB_N
AAA_18
AAA_7
ATPase_2
AAA_24
Zeta_toxin
ResIII
Torsin
AAA_3
T2SSE
AAA_25
NBD_SMAX1
DNA_pol3_delta2
AAA_28
OVT1
Motif
Other DBs
NCBI-ProteinID:
QDW25739
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All DBs
Position
3288261..3290861
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AA seq
866 aa
AA seq
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MNFNNFTIKAQEAVQQASEIAQGNQQQAIETAHLLKGLLTVDENVVSYVLKKLNVNLNSL
NQNLDAEIAKFPKVSGSNVYLSSNANSVLQKAQTFLKEFKDEFVSVEHLLLGILAVNDST
SKLLKEQGVNEKDLKKAITELRGDNRVTDQNAEATYQALSKYARNLNEYAESGKLDPVIG
RDEEIRRVIQILSRRTKNNPILIGEPGVGKTAIAEGIAFRIIKGDVPENLKSKVVYSLDM
GSLIAGAKYKGEFEERLKAVVKEVTQSDGDIILFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYLEKDKALERRFQKVMVEEPDTQDAISILRGLKERYETHHK
VRIKDEAIIAAVEMSQRYISDRFLPDKAIDLMDEAASKLRMEMDSVPEHVDALDREIMRL
EIEREAIKREKDDRKVQELSEEIANLSAERDEFKAKWQGEKDLVDAVNNELEQIEHYKLE
AEQAERAGDYGKVAEIRYGKIKEAQDKVEKLKADLESQQTDSRMLKEEVTADDIAGVVGR
WTGIPVTKLIASEREKLLHLEEELHQRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGSFI
FLGTTGVGKTELAKALAEFLFNDENALTRIDMSEYQERHAVSRLIGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNIGA
HLIQDNFKDLSDENRDEVIAKTKNELFEVLKQTIRPEFLNRIDELIMFTPLNRSEIRNIV
SLQFKQVQQTLAEMGIEMDASDEALDWLAQLGYDPQFGARPLKRVIQKRILNELSKEILA
GKIDKDSKIKLDMFDHKFVFLNQNID
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacaattttaccataaaagcccaggaagcagttcaacaggcttctgaaata
gcccaaggcaatcagcaacaggctattgaaacggcacacctgcttaaaggtctgcttact
gttgatgaaaacgtggtttcttatgttttaaagaaactgaacgttaaccttaattcacta
aatcaaaacttagatgcagagattgccaaattcccgaaagtgagtggaagtaatgtctat
ctgtcatcaaatgccaatagcgttttacagaaagcacaaacatttttaaaagagtttaag
gatgaatttgtctctgtagagcatttattattaggcatcttagccgttaatgatagcacc
tcgaaattattaaaagaacaaggcgttaacgagaaagaccttaaaaaagccattacagaa
ctacgtggtgataaccgggtaaccgatcaaaatgctgaagctacttatcaggccttaagt
aaatacgccaggaatttaaacgaatatgccgagagcggaaaactggatccggtaattggc
cgtgatgaagaaatccgtcgcgtgatccagattttatcacgaagaaccaaaaacaacccg
attttaattggtgagcctggtgtgggtaaaacagccattgcagagggaattgccttcagg
attattaaaggtgatgtgcctgaaaacctgaaaagcaaagtggtttattctcttgatatg
ggttcgcttattgccggtgcaaaatacaaaggcgagttcgaagaacgcttaaaagctgta
gttaaagaagttacacagagcgatggtgatattattctgtttattgacgagatccacact
ttggtaggtgctggcggtggcgaaggcgcgatggatgcagcgaatattttaaaacctgcc
cttgccagaggagagttacgtgccattggtgcaactactttggacgagtaccagaaatat
ttagaaaaagataaagcattggagcgtcgtttccagaaagtaatggttgaagaacctgat
acccaggatgccatttctatccttcgtggcttaaaagaacgttacgaaacccaccataaa
gtaaggattaaagatgaggccattattgcggctgtagaaatgagtcagcgctatatttca
gaccgtttcttaccagataaggccatcgatttaatggacgaggcggcatctaaactgcgc
atggaaatggacagtgtgccagaacatgttgatgctttagaccgtgagattatgcgttta
gaaattgaacgcgaagccattaaacgcgaaaaagatgatagaaaagttcaggaactttca
gaagaaattgccaatttatcagcagaacgtgatgaatttaaagcgaaatggcaaggagaa
aaagaccttgtagacgcggtaaataatgaattagagcagattgagcattataaattagag
gccgaacaagctgaacgtgccggagattatggcaaagtggctgaaatccgttatggaaaa
attaaagaggctcaggataaagttgaaaagcttaaagccgatttagaaagccagcaaact
gatagccgaatgctgaaagaagaagttacggctgatgatattgcaggtgtggttggtcgt
tggacaggtattccggttacgaaactgattgccagtgagcgcgaaaaattgcttcactta
gaagaagagttacatcagcgcgtggctggtcaggacgaagcaattgaagccatttctgat
gccatccgccgctcgcgtgcaggcttacaggataaacgtaaaccaattggctctttcatc
tttttaggtactaccggtgtgggtaaaacggagcttgcaaaagcccttgccgaattttta
ttcaacgatgaaaatgcactcacccgtattgatatgagtgaataccaggagcgccatgcc
gtgtcacggttaattggagcgcctccgggatatgttggttatgatgaaggtgggcagtta
accgaggccgttagacgtaaaccttactcagtggtattgcttgatgagatcgaaaaagca
catccggatgtatttaatattctgttacaggtattggatgacggacgtttaactgataat
aaaggtagaacggttaattttaaaaataccatcattatcatgacctcgaatatcggcgca
catttaattcaggataattttaaagatttaagcgacgaaaaccgcgatgaggtaattgcc
aaaaccaaaaacgaattgtttgaggtattgaaacagaccattcgtccggagtttttgaac
aggattgatgagctgattatgtttaccccgttaaaccgtagcgaaatcaggaatattgta
agcctacagtttaaacaagtacagcaaacattggcagaaatgggtatagagatggatgcc
agtgatgaagctttagactggctggcacaattgggttacgatcctcagtttggtgcaaga
ccgttaaaaagggtaatccaaaaaagaatcttaaatgagctttctaaagagatattggcg
ggtaagatagataaagacagcaaaattaagttagatatgttcgatcataagtttgtgttc
ctgaaccaaaacattgattaa
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