Pedobacter sp. KBS0701: FFJ24_013485
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Entry
FFJ24_013485 CDS
T06361
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pek03036
]
FFJ24_013485 (smc)
Chromosome and associated proteins [BR:
pek03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FFJ24_013485 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SMC_hinge
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDW25779
LinkDB
All DBs
Position
3340280..3343819
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AA seq
1179 aa
AA seq
DB search
MQLTRLEIKGFKSFGDKVTINFNEGVTAIVGPNGCGKSNVIDAMRWVLGEQSTKALRSEK
MENIIFNGTKNRKQAQLAEVSLSFDNTKNILPTAYSQVTVTRKLYRNGDSEYRLNDVQCR
LKDITDLFLDTGIGSDSYSIIELKMVDEIITNKEHSRRSLFEEASGISKYKLRKKQTFNK
LKDTEADLERVEDLLFEIEKNLKTLENQARKAERYYKLKEQYRELSIQLATHRIAFFRTD
LKALETQEQSQQVNRAELSTKIDTGEAELQKLKLGSISQEKNLSVQQKATNEFVSKIRAY
ESEKKVKNEQMRFLQEKETRLSGELEKDKNQVNHIKYNIKRLNEEVLTETEVFNRLESDL
KLLKSTLDTLREQQQTEKNRIDNLIKSVNDLQNQVYQSQKEIDILNIQKDALVQETNRNV
DDTETKTLELKAFDHALAELDIQVREKQANIKNLTEAEELLKEKLASSEINLSSNKEKLT
VENRKKDAKQNEYNLTKSLVDSLEGFPESIRFLKKNNTFAKSALLLSDVLFCNEDYRIAI
ENYLEPVMNHYVVDQYTDAVQAINLLTDASRGRANFFILENVPDKNPAISDHDGLISALS
VIEVDKKYQHLCNLLLQNVYIAIAEQENLFKATPTDSLTILAKNGKYAQTRFTLAGGSVG
LFEGKRIGRAKNLENLAKEIKASESLINQHNAAIKAETDNIFNLKEASKINQINALQQEM
NRLNNEHISVQTRRDQYQEFITTSENRKTDIAQKIVSIEKALSEKLPALVQLQKNQQEAH
INLQEQQLNYQEIADQVNESAGKYNQDNIRFHQQQNKLSGLEKDLDYRFVQEEALNKRIA
QNDKELQETLIQITATLQHTDLNDDTLLEMYQQREEMEKGLAEAEQAYFSSKGSINEVEN
DLTNIRKNREETDFLLTEIKDKKNALKIDLNALKERLAVEFNIDINDLLETETEIEALES
EFELRQKVEKMKRQLDEFGAINSMAMEAFKEMEERYTFIQNQKKDLNAAKADLLQTIKEI
DDTAKDKFMQAFTQAREHFIVVFRSLFNEEDSCDLILSDINNPLEADIDIIARPKGKRPL
SINQLSGGEKTLTATALLFSLYLLKPAPFCIFDEVDAPLDDTNIDKFNNIIRKFSDQSQF
IIVSHNKRTIASTDIIYGVTMVEQGVSRVVAVDLREVAA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaccaggttagaaattaaaggttttaagagctttggcgataaagtgaccatc
aactttaatgagggtgttaccgctatcgttggcccgaatggttgcggaaaatctaatgta
attgatgctatgcgctgggttttaggcgaacaaagcactaaagccctgcgatcagaaaag
atggagaacatcattttcaacggaacaaaaaaccgtaaacaggcacagcttgcagaggtt
tcattaagctttgataatacaaaaaatatccttcctaccgcttattcacaggttaccgta
acccgtaaactctacagaaatggagacagcgaatatcgcctaaacgatgttcaatgcagg
ttaaaagacattaccgacctttttctagacaccggaatcggctctgatagttattctatt
attgagctgaaaatggtggatgaaattatcaccaataaagaacacagccgtcgttctcta
tttgaagaagcatcagggatctcgaagtacaaattacgtaaaaagcagactttcaacaaa
ttaaaagacacagaagccgatttagagcgggttgaagatttacttttcgaaatcgaaaaa
aaccttaaaaccttagaaaaccaggcacgcaaagctgaacgttattataagttaaaagaa
caataccgcgaactgagcattcagttggctacacatcgcatagccttcttccgtaccgac
ttaaaagctttagaaacacaggagcaaagtcaacaggtgaaccgtgcagaacttagcacc
aaaatagacaccggtgaagccgaactgcaaaaacttaaactaggcagtattagtcaggaa
aagaacctttccgtacaacaaaaggctacaaacgagtttgtttctaaaatccgcgcttac
gaaagtgagaaaaaagtaaagaatgagcagatgcgttttttacaggaaaaagaaacacgc
ttatctggcgaactcgaaaaagataaaaaccaggttaaccacattaaatacaacatcaaa
cgtttaaatgaagaagttttaacagaaacagaggtttttaaccgcctggaatctgattta
aagctactgaaatctacgcttgatactttacgggagcaacaacagaccgagaaaaacagg
attgacaacctgatcaaatctgttaacgacctacaaaaccaagtataccagtcgcaaaaa
gaaattgatatcctgaacatccagaaagatgccctggtacaggaaaccaaccggaatgta
gatgataccgaaaccaaaaccttagagttaaaggctttcgatcatgctttagccgaactt
gatatccaggtaagggaaaagcaggccaatataaaaaacctcacggaagccgaagaactt
ttaaaagaaaaactggctagttccgaaatcaacctgagttcgaacaaggaaaaacttacg
gtcgaaaatcgtaaaaaagatgccaaacagaatgaatataacctgaccaaatcgctggtt
gacagtttagaaggttttcctgagtcgatccgttttttaaagaaaaacaatacttttgct
aaaagtgccctgctcctttccgatgtcttattctgtaatgaagattaccgcatagcaata
gaaaattatcttgaaccggtaatgaatcattatgttgttgatcagtatacagatgccgtt
caggccatcaacctcttaactgatgccagtcgcggaagggcaaatttctttattttagaa
aatgttcccgataaaaacccggccattagcgatcatgatggtctcatttccgctctatcc
gttattgaagtcgacaaaaaataccagcacctctgcaacctgcttttacaaaatgtatat
atcgcaatagccgagcaggaaaatttgtttaaagccacaccaacagatagtttaactatt
ttggccaaaaatgggaaatatgcccaaaccagatttaccttggcaggtggttctgtggga
ctatttgaaggtaaaaggattggtcgtgctaagaatttggaaaatctggcaaaagaaatt
aaagcttcagaatcactgatcaatcagcataatgcagctataaaagccgaaacagacaac
atatttaacctgaaagaggcttcaaaaattaatcagatcaacgctttacaacaggaaatg
aaccgtttaaacaacgaacacatttctgtgcagacccgccgagatcaatatcaggagttt
atcaccaccagcgaaaaccgcaaaacggatatcgctcaaaagatcgtatcgatagaaaaa
gccttgtcggagaaattgcctgcactggttcaactgcaaaaaaatcagcaagaagcacat
atcaatctacaagaacaacagcttaattatcaggaaattgccgatcaggtaaatgaaagt
gcgggaaaatacaaccaggataacatccgtttccaccaacaacaaaataagttatcgggt
ttagaaaaagatttggattaccgttttgtacaggaagaagctttaaataagcgcattgcc
caaaatgacaaagaattacaggaaacactaatacaaattacggcaacattacaacatacc
gatctgaatgatgatacacttttagaaatgtatcagcaacgtgaagaaatggaaaaaggg
cttgcggaagccgagcaggcatatttttcaagtaaagggagcattaacgaggtagaaaac
gacctgacgaacatccgcaaaaaccgcgaagaaaccgattttctgttaacggagattaag
gataaaaagaatgctttaaaaatcgacttaaatgccctaaaagaacgtttagctgtcgaa
ttcaatatcgatatcaatgatcttttagaaaccgagactgaaattgaagcactggaaagc
gagttcgaactgcgccagaaagtagaaaaaatgaaacgccagctggatgaatttggcgcc
atcaactccatggctatggaggcttttaaagaaatggaagaacgttatacctttatccag
aaccagaaaaaggacctcaacgccgccaaagccgatcttttacaaaccataaaagaaatt
gatgatacggctaaagataaatttatgcaggcttttactcaggcccgtgaacattttatt
gtggttttccgctctttatttaacgaagaagatagctgcgacctgattttatcagacatc
aataatcctttagaagctgatatcgatattattgcccgcccgaaagggaaaagaccatta
tctattaaccaactatctggtggagaaaaaacgttaacagctactgccctattgttttca
ctatatctgttaaaacctgcgcctttctgtattttcgatgaggttgatgccccattggat
gataccaacatcgataaattcaacaatattatccgcaaattctccgatcaatcgcagttt
atcattgtatcgcataacaaacgcaccattgccagcaccgatatcatttatggggtaacc
atggtagagcagggtgtttcgagagtagtagcagtagatttgagggaagtagcagcgtaa
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