Pedobacter sp. KBS0701: FFJ24_016045
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Entry
FFJ24_016045 CDS
T06361
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pek03016
]
FFJ24_016045 (truA)
Enzymes [BR:
pek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FFJ24_016045 (truA)
Transfer RNA biogenesis [BR:
pek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FFJ24_016045 (truA)
Prokaryotic type
FFJ24_016045 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QDW26244
LinkDB
All DBs
Position
complement(3984217..3984969)
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AA seq
250 aa
AA seq
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MSKKRYFIQLAYDGSLYHGWQIQPNAITVQELLDKAMSVFFRQPIETLGCGRTDAGVHAT
DFYAHFDVENVEELKVLNAITGINAMLPYQIAAKQIIPVHDDAHARFDATARAYKYYIHF
EKNPFKLNRSWLVKDKLDVEVMNDAAALLLNYTDFSCFSKSNTQTFTNNCKITKAVFEQT
EDGLVFTIQADRFLRNMVRAIMGTLVQIGKKEINLTDFKAIIESKNRSNAGQSVPACGLY
LVKIEYPYIR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaaaaaggtatttcatccaattggcttatgatggcagcttgtaccacggctgg
caaattcaacctaatgcaatcaccgttcaggaattgttagataaggcgatgtctgttttt
tttaggcaaccaatcgaaacattgggctgtggaagaacggatgctggcgtgcatgccaca
gatttttatgcccattttgatgttgaaaatgtagaagagcttaaggtcttgaatgccatt
acaggaatcaatgccatgttaccttatcaaattgcagcaaaacagattatacccgtacat
gatgatgcccatgcccgctttgatgcaactgcccgtgcttataaatattacattcacttc
gaaaaaaatcctttcaagcttaacagatcatggttggttaaagataaattggatgtagaa
gtgatgaacgatgcagcggcattattattaaattataccgatttttcgtgttttagtaag
tcgaacacacaaacttttaccaataactgtaaaataaccaaagccgttttcgaacaaacg
gaagatggactggtttttaccattcaggccgaccgttttttacgcaacatggtgagagcc
attatgggtactttggtacagatcggtaaaaaagaaataaatttaacggattttaaagca
attatagaaagtaaaaaccgcagcaatgctggtcaatcggtacctgcttgtggcttgtac
ttagtgaagatagaatatccttatataaggtag
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