Pedobacter sp. KBS0701: FFJ24_016305
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Entry
FFJ24_016305 CDS
T06361
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00500
Starch and sucrose metabolism
pek01100
Metabolic pathways
pek01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
FFJ24_016305 (glgX)
Enzymes [BR:
pek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
FFJ24_016305 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Glyco_hydro_70
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
QDW26292
LinkDB
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Position
complement(4053237..4055351)
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AA seq
704 aa
AA seq
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MHTVCQLPGRPYPLGSTWDGKGTNFALFAAHAQKVELCLYNEDGEETGRINIAERDHHIF
HCYIPDIGPGQLYGYRVYGVYEPINGHRFNPNKLLIDPYAKAISGDVEWCSAVFGYDLDG
EEADLSFSDTDSAPYMPKSVVVDMAYDWGDDKPLQIPYNQTVIYELHVKGFSRLNPLVPE
SLRGTYAGLAHPASIQYLKSLGITAVELMPVHQFVSDGHLIDRGLNNYWGYNTIGFFAPE
SRYASSGANGKQVNEFRDMVKALHAAGIEVILDVVYNHTAEGNEKGPTLSFKGIDNFTYY
RLEEKNKRYYTDYTGTGNTLNSRMPTVLRFIMDSLGFWIQEMHVDGFRFDLASTLARGLH
DVDRLGAFFDIIHQDPIISMVKLIAEPWDLGEGGYQVGKFPPGWAEWNGKYRDLMRRFWK
GDSGTLGQFAKRFLGSPDIYMQDYRRPTASINFITAHDGFTLHDLVSYNERHNLANGDHN
TDVEAENHSWNCGVEGQTDDNTINTLRARQKRNFLATLLLSQGIPMITSGDEIGKTQMGN
NNAYCQDNEISWIDWQHKDEALLKFTQDLIRLRLKHPSLRRKEWIVGDRIDSDGLLDIAW
FSPSGKIMETVDWQTDNSGSIGIFLHGEGIQGKSENGEDILDVHFYLIFNAHHDGVTFKL
PEEKYASKWSVEISTDEQIDQQAQFGAESSVEVGGRTLMVLRAG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtttgccagctacctggccgtccttatccgcttggatctacctgggacggc
aaggggactaattttgcactttttgcggcgcatgcccaaaaggtagaactctgcctttat
aatgaggatggagaagaaacaggccggattaatattgctgaacgtgatcaccatattttt
cactgttatattcctgatattggccccgggcagttatatggttaccgggtgtacggcgtt
tacgaaccgataaacggtcacaggtttaatccgaataaattactgattgatccctatgcg
aaggcaatatcgggtgatgtggaatggtgttctgcagtttttggatatgacctggatgga
gaagaagctgatttaagtttctctgatacggatagtgcaccttacatgcccaagtcggta
gttgttgatatggcctatgattggggggatgataaacctttacagattccctataatcaa
actgtgatttacgagcttcatgtaaagggtttttccaggttaaatcccttagttccagaa
tcgctgcgtggtacttatgcggggttggcccatccggcaagtattcaataccttaaatcg
ctgggtattactgctgttgagttaatgcccgtacaccagtttgtttctgacggccatctg
attgacaggggactaaataattattggggatataataccatcggtttttttgcgcccgaa
tccaggtatgcttcttccggtgcgaatggaaagcaggttaacgaattcagggatatggtt
aaagccctgcatgctgccggaatagaagttattttagatgtagtttataaccataccgcc
gaaggcaacgagaaaggcccgacactctcttttaagggaatcgataattttacttattat
aggctagaagagaagaacaaacgatattatacagattatacgggaacggggaatacctta
aattcaagaatgcctaccgtactcaggtttattatggatagcctggggttttggatacag
gagatgcatgtggatggattcaggtttgatctggcttcaactttggcaagggggctgcac
gatgttgacaggttgggtgcattttttgatatcatccaccaggatccgatcatttctatg
gtaaaactgattgctgaaccctgggatttaggagaaggcggctaccaggtgggcaagttc
cctccaggctgggcagaatggaacggcaagtaccgcgatctgatgcgccgtttctggaaa
ggcgacagtggaacactcggacagtttgctaaacggtttttaggaagtcctgatatttat
atgcaggattacagaaggccaactgccagcattaatttcattactgcacacgatggtttt
acccttcacgatttggtaagctataatgaacggcacaacctggcaaatggcgatcacaat
accgatgtcgaagcggagaaccactcgtggaactgcggtgtggaaggccaaacggatgat
aataccataaatacactccgtgccagacaaaaacgcaattttttagccacactgttactt
tcgcaaggcatcccgatgatcacctcgggcgatgaaataggaaagacccaaatgggtaat
aacaatgcctattgtcaggacaatgaaatttcctggatagattggcagcacaaagatgag
gcacttttaaagttcactcaagacctgattagactccgccttaaacatccgagcctgcgt
agaaaagaatggatagtgggtgatcggatcgattcggatggacttttggacattgcctgg
ttttcgccaagcggtaaaattatggaaactgtggattggcaaacggataattccggtagt
atcggcatttttcttcatggagaaggcatacaggggaaatcagaaaatggagaggatatt
ctggatgtccatttttacctcatcttcaatgcccatcacgatggtgtaacctttaaacta
ccggaagagaaatatgcatctaagtggtctgttgagatttcgacagatgaacagattgat
cagcaagcgcaatttggagcagaaagcagtgttgaggttggaggaagaacgttaatggta
cttagggcaggataa
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