KEGG   Pedobacter sp. KBS0701: FFJ24_016790
Entry
FFJ24_016790      CDS       T06361                                 
Name
(GenBank) DNA gyrase/topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
pek  Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:pek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pek03032]
    FFJ24_016790
   03036 Chromosome and associated proteins [BR:pek03036]
    FFJ24_016790
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pek02048]
    FFJ24_016790
Enzymes [BR:pek01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FFJ24_016790
DNA replication proteins [BR:pek03032]
 Prokaryotic type
  DNA Topoisomerases
   FFJ24_016790
Chromosome and associated proteins [BR:pek03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    FFJ24_016790
Prokaryotic defense system [BR:pek02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    FFJ24_016790
SSDB
Motif
Pfam: DNA_topoisoIV DUF4874
Other DBs
NCBI-ProteinID: QDW26383
LinkDB
Position
complement(4167277..4170189)
AA seq 970 aa
MSEELDQNVNEEHKHTITPINGLYENWFLDYASYVILDRAVPHINDGLKPVQRRIMHSLK
EMDDGRFNKAANVIGNTMKYHPHGDASIGDAMVQIGQKDLLIDMQGNWGDPVTGDSAAAP
RYIEARLSKFANEVVFNPDTTEWQLSYDGRNNEPITLPVKFPLLLAQGAEGIAVGLATKV
MPHNFIELLDASIEALKGVRPNILPDFFTGGMADFSNYNEGQRGGKIRVRAKITEKDKKT
LVITEVPFSTTTGSVIDSILSANDKGKIKIKKIEDNTAASVEIVVHLAPGISPDVTIDAL
YAFTACEVSISPNTCIIQGDKPLFLSVNDILIENTKHTKNLLKRELEIRLHELQEKIFFS
SLLKIFIQEGMYKNPEYENSSNFETVVEVLHILFDPFKPSLYREILPEDFKKLIDKPMSS
ITRFDVKKADEQMKNLEDEIKVVKNHLKHLTDYAIAWYQKLKDKYGKGRERKTEIRLFDR
VEASKVALANVKLYMNKEDGFIGTGLKKDIHVADCSDIDEVIVFREDGKCIITKVADKTF
VGKNIIHAQVFKKNDERTIYNMIYKDGASGTSYIKRFAVVGVTRDKEYDLTKGSKGSKVL
YFTANPNGEAEVVNVGLKPHSKLRKLQFDQDFAEVAIKGRGSQGNIISKYPVKKIVLKSK
GVSTLSGLKIWYDDLLKRLNVDGRGKYLGEFDGDDRILQVHRDGYYELSSFELSNHFDDG
LILIQKFDPEQIFAAVHFEGKAQNYFIKRFAFELQANGRKTIFISEEQKSKLLYLTSNPA
AKIIVDVLKGKTQIPETLDLILAELIDVKGLKANGNRLSPHDVQKVVLEEPEVIVEEDEE
TNVDENEDDGITINEAVSNEETTIDIESTNIEATDTTVIDEAVVVQPKPKFERTETPVVK
ADQPEVKEKPAAIEKPVVEKPKPTAEPVKKEEIKTEEKPGVEEKPAKKIDFEITNPDDID
IDDKGQLGLF
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgagtgaagaattagatcaaaacgtaaacgaagagcacaaacataccataaccccaatc
aatggtttatacgaaaactggtttctcgattatgcgtcttatgtaattctggatagggca
gttccacacatcaacgatggattgaaacccgttcaacgacgcattatgcactctttaaaa
gagatggatgatgggcgtttcaacaaagctgctaacgtaatcggtaacacgatgaaatac
catccgcatggtgatgcctcaatcggcgatgcgatggtacagatcggtcaaaaagattta
ttgattgatatgcagggtaactggggcgatccggttacgggcgatagcgctgcggcacca
cgttatattgaggcacgtttatcaaaatttgccaatgaagtggtattcaatcctgatacc
actgagtggcagttgagttatgatgggcgtaacaacgaaccgattactttgcctgttaaa
tttccgttattactggcgcagggggctgaaggtattgccgtgggtttagccaccaaagta
atgccgcacaattttattgaattactggatgcctcaatagaggcactgaaaggtgtgcgc
ccaaatatattacccgatttttttacaggcgggatggccgatttctcgaattataatgag
ggacagcgtggcggaaaaatccgcgtgcgtgcaaaaataactgaaaaggataaaaagact
ttggtgattaccgaggttccgttcagtaccacaacgggttctgttatcgatagtatttta
tctgccaatgataaaggtaaaatcaagattaaaaagattgaggataacacggcagccagt
gtagaaattgtagtgcacctggcaccaggtatttcgcctgatgttaccattgatgcattg
tatgcctttacggcctgtgaggtttcgatttcaccaaatacctgcattattcagggtgat
aagccactctttttgagtgtgaacgatatcctgatcgaaaataccaaacacactaaaaat
ttattaaaaagggaactcgagatccgcttgcacgagttgcaggagaaaattttctttagt
tcgttacttaaaatatttattcaggaggggatgtacaaaaatcctgaatatgaaaactca
tccaattttgaaaccgtagttgaggtattacacattttattcgatccgtttaaaccatca
ctttaccgcgaaatattacctgaggattttaaaaagctgattgataagccaatgagtagc
atcacccgttttgatgtgaaaaaggccgatgagcagatgaaaaacctggaagatgagatt
aaagtagttaaaaaccacttaaaacaccttaccgattacgccattgcctggtatcagaaa
ctgaaagataaatacggtaaaggtagagaacgtaaaaccgaaatccgtttgttcgatagg
gtagaagcatctaaagtggcactagccaatgtgaagctttatatgaataaggaagatggt
tttatcgggacggggttaaagaaagatatccatgttgccgattgttcggatatagatgag
gtaattgtttttcgcgaagatggtaaatgtatcattactaaggttgctgataaaaccttt
gtaggtaaaaatattatacacgcacaggtatttaagaaaaatgatgagcgtaccatttac
aacatgatttataaagatggtgcaagtggtacatcatatattaaaaggtttgccgtagtt
ggggtaacacgtgataaggaatacgacttaacgaaaggatcaaaaggatccaaggtatta
tattttaccgcgaacccgaatggtgaagctgaagtagtgaacgttggcttgaaaccgcat
tctaaattgcgtaaacttcagttcgatcaggattttgcagaggtggctataaaagggcgc
ggatctcagggaaatatcatttcaaaatatccggttaaaaaaatcgttctgaagagcaaa
ggcgtttctaccttatcaggacttaaaatctggtacgatgatttattaaagcgcttaaat
gttgatggtcgcggaaaatacctgggtgaatttgatggcgatgaccgcattttacaggta
catagagatggttattacgagttaagttctttcgaactgagcaatcactttgatgacgga
ttaatcttgattcagaagtttgatcctgaacagatttttgccgctgttcattttgaaggc
aaagcgcagaactattttatcaaacgttttgcattcgaactgcaggctaacgggaggaaa
acaattttcattagtgaggagcagaaatcgaagttgctgtaccttacttcaaatccggct
gcgaaaattattgttgatgttttaaaaggtaaaacccaaattccggaaacattggattta
atcttagctgaattgattgatgttaaagggttaaaagcaaatggcaatcgattatcacca
catgatgtacagaaagtagtattagaagagcctgaagtaattgttgaagaagatgaagaa
accaatgttgatgaaaatgaggatgatgggataactattaatgaggcggttagtaatgaa
gaaacgacaatcgatattgaatcaaccaatattgaagcgaccgatactacagttattgat
gaagctgttgttgtacagccaaagccaaaattcgaacgtaccgaaacacctgtagttaaa
gctgatcaaccggaggtaaaagaaaaacctgctgcgatagaaaagccagtggtagaaaaa
ccaaagccaacagccgaacctgttaaaaaggaagaaattaaaaccgaagagaaacccggg
gtagaagaaaaacctgctaagaagatagatttcgaaatcaccaatccggatgacatcgat
attgacgataaaggacagttgggcttgttttaa

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