KEGG   Pedobacter sp. KBS0701: FFJ24_016830
Entry
FFJ24_016830      CDS       T06361                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pek  Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:pek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pek03032]
    FFJ24_016830
   03036 Chromosome and associated proteins [BR:pek03036]
    FFJ24_016830
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pek02048]
    FFJ24_016830
Enzymes [BR:pek01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FFJ24_016830
DNA replication proteins [BR:pek03032]
 Prokaryotic type
  DNA Topoisomerases
   FFJ24_016830
Chromosome and associated proteins [BR:pek03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    FFJ24_016830
Prokaryotic defense system [BR:pek02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    FFJ24_016830
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c HATPase_c_3 DNA_gyraseB_C
Other DBs
NCBI-ProteinID: QDW26388
LinkDB
Position
complement(4182693..4184564)
AA seq 623 aa
MAEVIYNDDSIRSLDWKEHIRLRPGMYIGKLGDGSAQDDGIYVLLKEIVDNSIDEFVMGT
GKTIEITLSEQKVNVRDYGRGIPLGKVIDCVSKINTGGKYDSNAFQKSVGLNGVGTKAVN
ALSTSFTVQSYRDGKTKKVEFSKGEIVNEQPVIDTTQRNGTAITFYPDETIFRNYHYIPD
FVESMVWNYVFLNTGLTVNFNNQKYFSERGLYDLLSKFNKPEEIRYPIIHMIGPDIEIAM
THGQQYGEDYHSFVNGQHTTQGGTHQAAFRAAVVKTVREFFKKEFDAADVRSSIIAAISV
RVQEPVFESQTKTKLGSQNMGPEGPSVATFINDFVKKELDDYLHKNPDVADALLKRIMQS
ERERKDIAGIKKLANDRAKKASLHNKKLRDCKVHFNTTHEKRYETTLFITEGDSASGSIT
KSRDVDCQAVFSLKGKPLNCYELTKKVVYENEEFNLLQHALNIEDGLEGLHYNNIVIATD
ADVDGMHIRLLMMTFFLQFFPDLVKAGHVYILQTPLFRVRNKKETIYCYSDEERKNAIEK
LGNKPEITRFKGLGEISPDEFGLFIGKDIRLDPVILKDQTIKSLLEYYMGKNTPDRQQHI
IRNLRVEKDEVTEEPKVISEEVA
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggcagaagtaatttataacgacgacagtattcgttcactagattggaaagagcacatc
aggcttcgtccgggaatgtacattggtaaacttggcgatggttctgcacaggatgatggt
atttacgttttgttaaaggagattgtagataactctattgatgagtttgtaatgggaacg
gggaagaccatcgaaattacactatctgaacaaaaggtgaatgtgcgcgattatggtcgc
ggtattccattgggcaaagtaatcgattgtgtaagcaaaatcaatacgggtggtaaatac
gatagcaacgcctttcaaaaatctgttggtttaaacggggtaggtaccaaagccgttaat
gcactatctaccagttttaccgtacaatcttaccgtgatggaaaaacgaaaaaggtagaa
ttttctaaaggcgaaattgtaaacgagcaacctgttatcgataccactcagcgcaatggt
accgcaattactttttatcctgacgaaaccattttcaggaactaccattacattcctgat
tttgtagagagcatggtgtggaactatgttttcttgaacacgggtttaaccgtaaatttt
aacaaccagaaatatttttcagagcgaggcctgtacgacctgctctctaaatttaataag
ccagaagaaatccgttacccgattattcacatgattggaccggatattgaaattgccatg
acccacggtcagcaatatggcgaagactaccactcatttgtaaacggacaacacactacg
cagggtggtacacaccaggcggcctttagagctgcagtagtgaaaacggttagagagttt
ttcaaaaaagagtttgatgcggccgacgtacgttcgtccattatagcggcaatttctgta
cgtgtgcaggagcctgttttcgaatcacagaccaaaacaaaactgggttcgcagaatatg
ggaccggaaggaccatcggtagctacttttattaacgattttgttaaaaaagagcttgac
gattatctgcataagaacccagatgttgccgatgccttgctgaaaagaattatgcaatct
gagcgtgagcgtaaagatattgcaggcatcaagaaactggcgaatgacagggcaaaaaag
gcgtccttacacaataaaaaactgcgcgactgtaaagtgcattttaatactacgcacgag
aaacgatatgaaactaccttgtttattaccgaaggagattcggcatcgggttcgatcaca
aaatcgcgcgatgtagattgtcaggccgtatttagtttaaagggtaagccgcttaactgt
tatgagcttaccaaaaaagtagtttacgaaaatgaagaatttaaccttttacagcacgct
ttaaatatcgaggatggtttagaaggattgcattataataatattgtgattgcaacagat
gctgatgtagacggtatgcatatccgtttgttaatgatgactttcttccttcagtttttc
cctgatctggtaaaagctggtcatgtttatattttacaaacgccgcttttcagggttcgg
aataaaaaggaaaccatttattgttatagtgacgaagagcgtaaaaatgcaatcgaaaaa
ctaggcaataaaccagaaataacgcgatttaaaggtttaggcgaaatttcgcccgatgaa
tttggattatttattggaaaagatatcaggttagaccctgtgattttaaaagatcaaacc
attaagagcctgctcgaatattacatgggtaaaaatacgccagacaggcaacagcacatt
atccgtaacctgagggtagagaaagacgaagtgactgaagaacctaaagtgattagtgaa
gaggtagcataa

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