Pedobacter sp. KBS0701: FFJ24_016890
Help
Entry
FFJ24_016890 CDS
T06361
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pek03016
]
FFJ24_016890 (truB)
Enzymes [BR:
pek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FFJ24_016890 (truB)
Transfer RNA biogenesis [BR:
pek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FFJ24_016890 (truB)
Prokaryotic type
FFJ24_016890 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
ANM3_C2H2_Zf
Motif
Other DBs
NCBI-ProteinID:
QDW26400
LinkDB
All DBs
Position
4201849..4202580
Genome browser
AA seq
243 aa
AA seq
DB search
MSTENSKFKDFNFAEGELLLINKPYKWTSFDVVGKIRNSLKPLKLKVGHAGTLDPLATGL
LIICTGKLTKQIDTFQAEEKEYTGTMILGATTPSFDMETEVDETFDISHITEEEIYAACK
AFIGNIEQYPPAHSAVKVNGERLYVKARLGEEVELRKRFVSVPEFEITRIELPEIDFRIV
CSKGTYIRSLISDFGKTLNNGAYLSKLTRTRSGNFLLKDAFEVLELVNYIRSKKEEAKTE
TEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccgaaaattctaaattcaaagacttcaattttgctgaaggcgaattgctttta
attaacaaaccatacaaatggacttcatttgatgtggttggcaaaatacgtaattcttta
aaaccactaaaactaaaagttggtcatgccggcactttagatccacttgctacaggttta
ttgattatctgtaccggcaagctaaccaaacagatagacacttttcaggctgaagagaaa
gaatataccggcaccatgattttgggcgctactaccccgtcatttgatatggaaacggag
gttgatgaaaccttcgacatcagccacattaccgaagaagaaatttatgctgcctgtaaa
gcatttattggcaatatcgagcaatatccgcctgcacattcagcagtcaaggtaaatggt
gaacgtttatacgtaaaagcaagattgggtgaagaggttgaattaaggaaacgttttgta
agtgtaccggaatttgaaattacacggatcgaactgccagaaatcgatttcaggattgtg
tgtagcaaaggtacttatatccgttcattaatatccgattttggtaaaactttaaataac
ggcgcttacctttctaaacttacccgtacccgaagcggaaactttttactaaaagatgcg
tttgaggtattagaacttgttaattatattcgcagtaaaaaagaagaagctaaaactgaa
acagaagcatga
DBGET
integrated database retrieval system
