Pedobacter sp. KBS0701: FFJ24_017030
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Entry
FFJ24_017030 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_017030
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_017030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QDW26427
LinkDB
All DBs
Position
complement(4239717..4241369)
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AA seq
550 aa
AA seq
DB search
MKNKSIIYTALALVVSMGTACTKLDENAYDVIPAEKFYSNKNEVISAVLRPYTHANAWVT
PSGQDGWWRLAELSADQLAWPTKGPHGEDGGKWKRLHYHTWTVDEGGINNAWSLMYGGVG
FCNDAIGNIEKRDIAQMGITQEEKNGYVAELKLLRAFHYLKLMDLFGNIPIATDLVDPSN
PVLPNTTARKDVFTFIEKEIKDNINNVPKLAKSQLGRMSQASGYAMLVELYLNAEVWTGT
PRWDDCIAAADKLINNEAGGQNGNMALDPNITDQFKNTNDQSKEVIFSIAYDFTRAKFEP
SWTGEFYHFAQRDIYGGGRNGNDGIVLIPGVYEKFEADDLRKTGWLLFGPQKKFADGSDV
QGTVEYAGKPLVFVDNIQRNSKNSTVSNMSEGEENSGVRFNKYKLGNSIPGIVNGVRVEP
NPNYNNTDWNVYRLTWIYFAKAEAIMRKNGGVANADAVKLINDCKSRAYTPAVWASKAYT
VATLTLDELLAERGREFIFEGFRRDDLIRFGKFATGSWWDHSPSSSFKTLYPIPQRQRDL
NVKLTQNPGY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaatcaatcatatatacagcccttgcattagtggtaagtatgggcacagcc
tgtactaaactagatgaaaatgcatacgatgttatcccggctgaaaaattctactctaat
aaaaacgaagttatttctgctgttttaaggccgtatactcatgcaaatgcctgggttacg
ccatctggacaagatggatggtggcgattggccgaactttcagctgatcagttggcatgg
ccaacaaagggaccacatggtgaagacggaggcaagtggaaaagattacattaccatacc
tggacggttgatgaaggaggtatcaataatgcatggtccctaatgtacggaggggttggt
ttttgtaatgatgccattggaaacatcgagaagagagatattgcgcagatgggaattacc
caagaggaaaaaaatggctatgttgcagaactaaaattacttagggcatttcactattta
aagttgatggatttgttcggtaatattccaattgcaacagatctggttgatccatcaaat
cctgtattgccaaatactactgcaaggaaagatgtttttacctttattgaaaaggaaatt
aaagataatatcaataacgtgcctaagctggcaaaatcgcaacttggaagaatgagccag
gcaagtggttatgccatgctggtggagttatatttaaatgcagaagtatggactggtaca
ccacggtgggatgattgcatcgcggcagctgataaattaattaataatgaggcaggtggt
caaaatggtaatatggcgcttgatccaaacattaccgatcaatttaaaaatacaaatgat
caatcaaaagaagttattttctccattgcttatgattttaccagagctaaatttgaacca
tcgtggacgggtgagttttatcattttgcacaacgtgatatttatggcggcggcaggaat
ggtaacgatggcatcgttttaattccaggtgtttatgaaaaatttgaagctgatgatttg
cgtaaaactggctggttactgtttggtcctcagaaaaagttcgctgatggatctgatgtt
caaggtacagtagagtatgcaggcaagccacttgtatttgttgataacattcaaagaaat
tcgaaaaattctaccgttagcaatatgagtgagggcgaagaaaatagtggagttcgtttt
aataaatataaactgggcaattctattccaggaattgtaaatggggtgagagtagaacct
aatccaaattacaacaatacagactggaatgtttaccggttaacatggatctatttcgca
aaagctgaagccattatgcgtaaaaatggaggtgttgccaatgcagatgcagttaagctc
attaatgattgtaaatcgagagcttatacgccggcagtttgggctagcaaagcttatacc
gtggctaccttaacgcttgatgagcttttggcagaacgcggcagggaatttatatttgaa
ggttttagaagggacgatttgattagattcggaaaatttgcaaccggaagttggtgggat
catagtccatcctcatcatttaaaacattatatcctattccacaaaggcaaagagatttg
aatgttaaactgactcaaaacccaggttactga
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