Pedobacter sp. KBS0701: FFJ24_019035
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Entry
FFJ24_019035 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_019035
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_019035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
Motif
Other DBs
NCBI-ProteinID:
QDW26806
LinkDB
All DBs
Position
complement(4718024..4719541)
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AA seq
505 aa
AA seq
DB search
MKNIITKTGVLIAMATAVTVSSCKKLLYEEPKDAPYEQTFWQSSRDVRSAIAGNYAMMRS
AITSKNNRYYMYGDAIAKNYFTIQYGGDGLEGIQGGDFTFQYNINTLANYTLYYKSIAMS
NLILKKVNAMSDAQLSTEDDPAQFRNSVIGQAYFLRALSYFMAVRVWGDVPLVTESYEDP
INAPQLPRSPKSEIMKLVENDCHKAINLLSWNYANTGDAKVTANKGSAYALLAHLYLWRA
TMSDVSVDAPNLTDVNNADTTINTLISKGGYVLTDTANYKNTFIGRSSEGIFEINISENT
LEGSNSSIGSYFLNENYIKGYGNNPRFYTTPLYLNNHFETTTDIRYKKGFDLANPDKPMS
VKYSNVTYRNPGQKLDPYLSNNIIIFRLGDMKLLKAEIALYKKDAATAIGIINDFRKRND
PDPVLIPAGSSVDQVMDEYAYERGKEMYLEGHLFYDLLRTRRYGLIVDWLTESRFRREGF
YWPVDPALFRNNPLLKQTPYWLGKV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataatcacaaaaaccggtgtacttatcgcaatggctacagcggttaccgta
agttcctgtaaaaaactattatatgaggaacctaaggatgcaccttacgaacaaacattc
tggcaatcatcaagagacgtaagaagtgccatcgctggtaattatgccatgatgcgtagt
gcgattaccagtaaaaacaatcgttattacatgtacggtgatgctatcgccaaaaattat
tttacgatacagtatggcggggatggtttagaagggattcagggtggagattttaccttt
caatacaatattaatacgctggcaaattatactttatattataaaagtattgccatgtct
aatctgattttgaaaaaagttaatgccatgagcgatgcgcagttgtcaaccgaagatgat
cctgctcaattccggaattcagtgattggtcaggcgtatttccttcgtgcattaagttac
tttatggcggtaagggtctggggcgatgtaccactagttacagagtcttatgaagacccg
atcaatgcgcctcaattgccaagaagtccgaaatcggagatcatgaaattagttgaaaat
gattgccacaaagccattaatctattaagctggaattatgccaataccggagacgcaaag
gtcactgcaaataagggctcagcatatgcccttttagctcatctgtatctttggagagct
accatgtcagatgtttccgttgatgcacctaatttgactgatgtaaacaatgctgataca
actataaatacattaattagtaaaggaggttatgttttaacagataccgctaattataaa
aatacttttatcggtcgttcttctgaaggaatatttgaaattaacattagtgagaataca
ttggaaggttctaatagttccataggttcgtattttttaaatgaaaattatattaaaggt
tatggaaacaacccacgtttttataccacgcctctgtatcttaataatcatttcgaaacc
accactgatatccgttataaaaagggctttgaccttgctaacccagataaaccaatgagt
gtaaagtacagtaatgtaacttacagaaatcctgggcaaaaattagacccttatctaagc
aataacattatcattttcagactgggtgatatgaaactacttaaggcggagattgcactt
tacaaaaaggatgcagcaacagctatcggtattatcaatgatttcagaaaaagaaatgat
ccagatccggtattaattcctgctggaagctccgtagatcaggtaatggatgaatatgct
tatgagcgtggtaaagaaatgtacctggaaggacatttattctatgatttgcttaggacc
agaagatacggtcttatcgtagattggcttacagaaagcaggtttagaagagaaggtttt
tattggcctgtagaccctgcattgtttagaaacaatccgttattgaaacaaacaccatat
tggttgggtaaagtataa
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