Pedobacter sp. KBS0701: FFJ24_019260
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Entry
FFJ24_019260 CDS
T06361
Name
(GenBank) tRNA threonylcarbamoyladenosine dehydratase
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pek03016
]
FFJ24_019260
Transfer RNA biogenesis [BR:
pek03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FFJ24_019260
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Motif
Pfam:
ThiF
Shikimate_DH
MurD-like_N
Sacchrp_dh_NADP
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
QDW26846
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Position
4773337..4774128
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AA seq
263 aa
AA seq
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MSDVSWLSRSALLVGNDGIDKLQSKHILVIGLGGVGSFAAEFICRSGIGEMTIVDGDVVD
PTNRNRQLPALATNHGVSKAAIMQERLLAINPDLKLHVVNTFLTPEKCREILESKFDYIM
DCIDSVMPKITLLGTALEKNIPIVSSMGAGGKMDPTRLRITLLPDTYQCVFASYVRKRLN
KLPNAAKIKAVFSTEEMDKNSMIMTDGSNFKRSAYGTVSYLPAAFGGACASVVIRDLLGL
PIEMAERPARISHKTLNKRKSKK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgttagctggctttcgcgctctgccctccttgttgggaatgatggaatagat
aaacttcaatcgaaacacattttggtgatcggtttgggtggcgtaggctcatttgctgcc
gaatttatctgccgttcgggtattggcgaaatgactattgttgatggtgacgtggtagat
ccaaccaaccggaacaggcaactgcccgctttagccaccaaccatggcgtaagtaaagct
gcaatcatgcaggaacgtttgttggctattaatcctgatttaaagctccatgtggtaaat
acctttcttactcctgaaaaatgcagggaaattttagaatcgaaattcgactacattatg
gattgcattgatagtgtgatgcctaaaattactttgttgggaactgctttagaaaaaaac
atcccaatcgtgagttcgatgggggccggtggtaaaatggatccaacacgtttaaggatt
acgcttcttcctgatacttatcaatgtgtatttgccagttatgtgcgcaaaaggttgaat
aaactccctaatgcagcaaaaataaaagcagttttttctacagaagaaatggataaaaac
tccatgatcatgaccgatggaagtaatttcaaacgttctgcttatggtacagtctcttac
ctgcccgcagcttttggcggtgcatgtgcatcggtggtcatccgcgatttgcttggccta
cccatcgaaatggccgaacgtcctgcaaggatcagtcataaaacacttaataagaggaaa
agtaaaaaatag
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