Pedobacter sp. KBS0701: FFJ24_019605
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Entry
FFJ24_019605 CDS
T06361
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00260
Glycine, serine and threonine metabolism
pek00460
Cyanoamino acid metabolism
pek00630
Glyoxylate and dicarboxylate metabolism
pek00670
One carbon pool by folate
pek00680
Methane metabolism
pek01100
Metabolic pathways
pek01110
Biosynthesis of secondary metabolites
pek01120
Microbial metabolism in diverse environments
pek01200
Carbon metabolism
pek01230
Biosynthesis of amino acids
pek01240
Biosynthesis of cofactors
pek04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FFJ24_019605
09102 Energy metabolism
00680 Methane metabolism
FFJ24_019605
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FFJ24_019605
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FFJ24_019605
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FFJ24_019605
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FFJ24_019605
Enzymes [BR:
pek01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FFJ24_019605
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QDW26905
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Position
complement(4862749..4864020)
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AA seq
423 aa
AA seq
DB search
MTRDNQIFELIDKELNRQEHGLELIASENFVSKQVMEAAGSVLTNKYAEGLPGKRYYGGC
QVVDVVEQIAIDRAKELFGAAWVNVQPHSGAQANAAVMLAVLQPGDKILGFDLSHGGHLT
HGSPVNFSGKLYQPLFYGVEKETGLIDYKKLEEVALAEKPKLIICGASAYSREWDYAFIR
AVADKIGALVLADISHPAGLIAKGLLANPLPHCHIVTTTTHKTLRGPRGGMIMMGQDFEN
PWGLKTPKGEIRLMSNLLDMAVFPGTQGGPLEHIIAAKAIAFGEALSEEYGTYIKQVAAN
AQAMAKAFVAKGYGIISGGTDNHLMLIDLRNKNITGKVAENALEKAEITVNKNMVPFDDK
SPFVTSGIRVGTAAITTRGLKEAEMEQIVELIDRVLTNPEDEVNLNTVKAEVIKLVSAFP
LYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgacaaccaaatttttgaacttatcgataaagaattaaaccgccaggagcat
ggtttagagcttattgcatcagaaaattttgtaagcaagcaggtaatggaagctgccgga
tcggtactgaccaataaatatgccgaaggcttaccaggaaaacgttactatggcggttgc
caggtggtagatgtggtagagcagattgctatcgatagggcaaaagaattgttcggtgcg
gcttgggtaaacgttcagccacattctggagcacaggctaatgcggcagtaatgcttgct
gttctgcaaccaggcgataaaatattaggatttgatctttctcatggcgggcacttaaca
catggttcgccagttaacttttcgggtaaattatatcagccattattttatggtgttgaa
aaagaaaccggactcattgattataaaaaattagaggaagttgctttagccgaaaaacca
aaactgattatctgcggagcctctgcctactcacgtgagtgggactatgcttttatccgt
gcagtagctgataaaattggtgctttggttttagctgatatttctcacccggcaggttta
atcgcaaaaggattgttagcgaacccacttccacactgccatattgtaaccactacaacc
cacaaaactttacgtggaccacgtggcggtatgattatgatgggccaggatttcgaaaat
ccatggggattaaaaacgcctaaaggcgaaatccgtttaatgagcaacttgctcgatatg
gcggtttttcctggtacacaaggtggtccgttggagcatattattgccgctaaagcaatt
gcctttggcgaagctttaagtgaagagtacggaacatacattaaacaggtagctgctaat
gcacaggcaatggctaaagcatttgtagcaaaaggttatggcattatttcaggtggtaca
gataaccatttaatgttaattgatttgcgcaataaaaacatcaccggtaaagtcgccgaa
aatgctttagagaaagcggaaatcaccgtgaataaaaacatggtgccttttgatgataaa
tctccgttcgtaacttccggtatccgtgtgggtactgctgccatcactacccgaggttta
aaagaagccgaaatggaacagattgttgaattaatcgacagggttttaactaatccggaa
gatgaagttaacctaaatacagtgaaagctgaagtgattaaattggtgagtgcatttcca
ctttataaatag
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