Pedobacter sp. KBS0701: FFJ24_020480
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Entry
FFJ24_020480 CDS
T06361
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pek03000
]
FFJ24_020480
Transcription factors [BR:
pek03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FFJ24_020480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_23
HTH_24
HTH_3
MarR_2
HTH_38
Sigma70_r4
HTH_IclR
HTH_10
HTH_Crp_2
Sigma70_r4_2
Sigma54_DBD
HTH_7
Crp
MarR
HTH_5
HTH_AraC
HTH_AsnC-type
HTH_29
HTH_50
HTH_28
Phage_terminase
HTH_36
Xre-like-HTH
HTH_11
HTH_31
SAP
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QDW27069
LinkDB
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Position
complement(5072809..5073819)
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AA seq
336 aa
AA seq
DB search
MRFETSTIKDIAKALGLSTSTVSRALRDRYEISEETKKLVLAYAEKVNYRANPIARSLKE
RRSYSIGIIVSEIANNFFSQVINGIESIAYDKDYHVIISQSHESYKQEKLNVEHLASRSI
DGLLIALSSETQDIGYLRHLYAKGLPIVFFDRVPEDFETHKVIANNFKGSFDATEHLILS
GKRTIAHLTNSENLSITKERLAGYKAALVKYHIEFKPELVKYCQHGGMHSAELEEAVKEL
LPLKPDGIFISSDRLTTGCIMALKKTNPEVAHKIAIAGFTNSNLVELFSPSLTSVKQPAF
EMGQVATELLISMIEAKRPVTEFETKVLDTELVKKR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgaaacatctaccataaaagatattgctaaagcattaggactctctacatct
acggtttcccgggctttaagagaccgttacgaaattagtgaggaaactaaaaagctggtt
ttagcctatgccgaaaaggtaaattatcgtgccaatccgattgccagaagtttaaaagag
cgccgtagttattctatcggaattattgttagtgaaattgccaacaactttttttctcag
gtgataaatggcattgaatcaattgcttatgataaagattatcatgtaattatttctcaa
agccacgaatcgtacaaacaggaaaaactaaacgttgaacacctggcatcgcgttccatt
gatggtttattaattgcactttcttcagaaacacaggatatcggttacttaaggcattta
tacgctaagggtttacccattgtattttttgatcgcgtaccggaagattttgaaacccat
aaagtaattgccaataactttaagggctcttttgatgccacagaacatcttattttatca
ggaaaaagaaccattgcccatttgacgaattcagaaaacctttcaataacgaaagaaagg
ttagcaggttataaagcggctttggttaaatatcatatcgaatttaagcccgaactggta
aaatattgccagcatggtggtatgcacagcgcggaactggaagaagcggtgaaagaactt
ttgccgcttaaacccgatgggatttttatctcgagcgaccgcttaaccacaggttgcatt
atggctctgaagaaaaccaatcctgaagtggcacataaaattgcgattgcaggttttacc
aattccaatcttgtcgaattgttttcgccatccttaacctcagttaaacagcctgcattc
gaaatgggacaggtggccaccgaattattgatttcgatgatcgaagctaaaaggcctgtt
accgagttcgaaaccaaggttttggatacggaactggtgaagaagcgctga
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