Pedobacter sp. KBS0701: FFJ24_020710
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Entry
FFJ24_020710 CDS
T06361
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00220
Arginine biosynthesis
pek00240
Pyrimidine metabolism
pek00250
Alanine, aspartate and glutamate metabolism
pek01100
Metabolic pathways
pek01110
Biosynthesis of secondary metabolites
pek01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FFJ24_020710 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FFJ24_020710 (carB)
00220 Arginine biosynthesis
FFJ24_020710 (carB)
Enzymes [BR:
pek01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FFJ24_020710 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QDW27111
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Position
5127797..5130634
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AA seq
945 aa
AA seq
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MPKDTSIRSVLIIGSGPIIIGQACEFDYSGSQAALSLKEEGITVSIINSNPATIMTDKVI
GDHVYLRPLTVDSIEVILQEHIDSADLPRIDAVLPTMGGQTALNLCKEAEERGVWEKYGV
KVVGVDVAAIEKTENREAFRQLMVDIGVGVAQSKIANSFLEGKEAAQEIGYPLVIRPSYT
LGGSGGGFVHKKEEFDAALKRGLEASPTHEVLVEKAVLGWKEYELELLRDSNDNVIIICS
IENFDPMGIHTGDSITVAPAMTLSDRCYQDMRNQAIKMMRAIGNFAGGCNVQFSVNPAND
EIIAIEINPRVSRSSALASKATGYPIAKIAAKLAIGYNLDEIENQITKTTSAYFEPTLDY
VIVKVPRWNFDKFKGANKELGLQMKSVGEVMAIGRTFIEALQKACQSLEINRAGLGADGR
QVRNIEEIMDGLEHASWNRLFLIKDAMVMGVPLESIRKVTKIDKWFLNQIQELVLLETEL
KRYSLNNIPQDFFVTLKQKGFSDIQIAWLLGNVTEDEVYDRRKALGINRVYKMVDTCAAE
FPAKTPYYYSTFEEENESKPSDRKKVIVLGSGPNRIGQGIEFDYSCVHGLLAAKESGFEA
IMVNCNPETVSTDFNMADKLYFEPVFWEHVREIIDLEKPEGVIVQLGGQTALKMAEKLTE
KGIKIIGTSFENMDIAEDRGRFSDLLKELDIPYPKYGVAENAEEAIVVANEVGYPVLVRP
SYVLGGQGMSIVINDEDLEKAVVKLLGDLPGNRVLIDHFLDRAEEAESDSISDGEDVHIV
GMMEHIEPAGIHSGDSFAVLPTFSLSETVTKAMEEYSIKIAKALDVRGLLNIQFAIKDEK
VYVIEANPRASRTVPFIAKAYDVPYINIAAKIMLGVAKLKDFTIERKLKGYAIKEPVFSY
EKFPEVTKELGPEMKSTGEAIRFIKDLEDPYFRKLYKDKSMYLSK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagacacttccatacgctcagtactgattatcggatctggaccaattattatt
ggccaagcctgtgaatttgattattcaggttcgcaagcggcgctttctttaaaagaagaa
gggattaccgtttctattatcaactccaatccggcgaccattatgacggataaggttatc
ggcgaccatgtttacctgcgtccgttaaccgttgattcaatagaagttattttacaagag
catatcgactctgcagatttacctagaattgatgccgtacttcctacaatgggaggccaa
actgcactaaacctctgtaaagaagccgaagaacgtggtgtttgggaaaaatacggtgta
aaagtggttggtgtagacgttgccgcgattgaaaaaaccgaaaaccgtgaagctttccgc
cagttaatggttgatatcggtgtaggtgttgcacaatcgaaaattgccaactcattttta
gaaggtaaagaagctgcacaagaaatcggctacccattggtaatccgcccttcgtatact
ttaggtggttctggcggtggtttcgtacataaaaaagaggaattcgatgctgcgctaaaa
cgtggtttagaagcttcgccaacacacgaagtattggtagagaaagctgttttaggctgg
aaagaatacgagttagagttgctaagagatagcaacgataacgtaatcattatttgttcg
atcgaaaacttcgatccgatggggatccacacgggagattcgatcacggttgctccggcg
atgactttatctgatcgttgttaccaggatatgcgtaaccaggcgatcaaaatgatgcgt
gcaatcggtaacttcgccggcggctgtaatgttcagttctcagttaatccggcaaatgac
gagattatcgccatcgaaattaacccacgtgtatcacgttcatcagctttggcaagtaag
gcaaccggttatccgattgcgaaaattgcagctaaactggctatcggatacaacctggat
gaaattgaaaatcagattaccaaaacaacttcagcatacttcgaacctactttagattac
gtaattgttaaagtaccgcgctggaacttcgataaatttaaaggcgctaacaaagagctt
ggcttgcagatgaaatcagtaggtgaggtaatggcaattggccgtacctttatcgaagca
ttacaaaaagcttgtcagagtttagagatcaaccgcgctggtttaggtgcagatggcaga
caggttcgcaatattgaagagattatggacggtttagagcatgcctcttggaaccgttta
ttcttaataaaagatgccatggtaatgggtgtgcctttggagtctatccgtaaggttact
aaaattgataaatggttcttaaaccagattcaggagcttgtattgcttgaaactgaacta
aaaagatactcattaaataacatccctcaggatttcttcgtaacccttaagcaaaaaggc
ttctctgatattcagatcgcgtggttgttaggcaatgttactgaagatgaagtttacgat
cgccgtaaagctttaggcataaacagggtgtataaaatggttgatacctgcgctgcagag
tttccggccaaaacaccatattactattctactttcgaagaagagaatgaatcaaaacct
tctgacaggaaaaaagtaattgttttgggttcaggacctaaccgtattggtcagggtatc
gaattcgattattcatgtgtacatggtttattggctgcaaaagaatcgggtttcgaagcc
atcatggttaactgtaaccctgaaacggtttctaccgactttaacatggccgataaatta
tacttcgagcctgttttctgggaacatgttcgcgaaattatcgacttagaaaaacctgaa
ggtgtaattgtccagctgggtggtcaaaccgcgctgaaaatggcagaaaaattaactgaa
aaaggcatcaaaattatcggaacatctttcgagaacatggacattgccgaagaccgcggc
cgtttctctgatctattgaaagaattagacatcccttatccaaaatatggtgttgcagaa
aatgccgaggaggccattgttgttgcaaatgaggtaggttacccggtattggttcgtccg
agttatgtactgggtggacagggtatgagtatcgtaattaacgatgaagaccttgaaaaa
gcagtggtgaaattattaggtgatttaccgggcaaccgcgtattgatcgatcactttttg
gatagggcagaagaagcagaatctgattcaatatctgacggtgaggatgtacacattgta
ggtatgatggaacacattgagccagcaggtatccactcaggagattcatttgcagtatta
cctacattcagcttatccgaaacggtaacaaaagcaatggaagaatactccattaaaatt
gcaaaagcgttagatgtacgtggtttactgaacatccagtttgctattaaagatgagaaa
gtatatgtaatcgaagcgaatcccagggcatcgcgtacggttccgttcatcgcaaaagct
tacgatgttccatacatcaacattgcggccaaaattatgttaggcgtagctaaactgaaa
gattttaccatcgagcgcaagcttaaaggttacgcgattaaagaaccggttttctcttac
gaaaaattcccggaggtaacaaaggaattaggtccggaaatgaaatctacaggtgaagcc
atccgtttcatcaaagatttagaagacccttacttccgcaagctttacaaagacaaatca
atgtatttgagtaagtaa
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