Pedobacter sp. KBS0701: FFJ24_020810
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Entry
FFJ24_020810 CDS
T06361
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00730
Thiamine metabolism
pek01100
Metabolic pathways
pek01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FFJ24_020810 (thiC)
Enzymes [BR:
pek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
FFJ24_020810 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QDW27131
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Position
5152602..5154485
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AA seq
627 aa
AA seq
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MKQEKTPNQEVISRSPFPASRKIFVSGKIHDIQVAMREISLTETKIHNGFGLTEPNPPVT
VYDTSGPYTDPNTVIDVRKGLPRLREQWIKDRQDVTQLDQLSSAYGQQRLADDKLDALRF
NYTTKPYKAQPGANVSQMHYAKKGIITAEMEYIAIRENQQIELLNAQLGDQHEVMNHQHQ
GNSFGANTPKGYITPEFVRDEVAAGRAVIPCNINHPELEPMIIGRNFLVKINANIGNSAV
TSTIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNG
KAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRITGIVSRGGSIMAKWCLA
HHKENFLYTHFEEICEIMKAYDVAFSLGDGLRPGCIADANDAAQFSELETLGELTKIAWK
HDVQTIIEGPGHVPMHLIKANMEKQLEHCGEAPFYTLGPLTIDIAPGYDHITSAIGAAMI
GWFGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARF
EFRWEDQFNLSLDPDTAKEFHDETLPAEGAKIAHFCSMCGPNFCSMKITQDVREYAAKQG
VAADEALAKGMEEKSKEFTEKGSEIYS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaaaaaacaccaaaccaggaagtcatcagtcgcagcccatttccggcatca
cgcaaaatatttgtatccggaaaaatccacgatatccaggtggccatgcgcgaaatcagt
ttaaccgaaacgaaaatccacaatggatttggtttaacagaacccaatccacccgtaacc
gtgtatgataccagtggcccttacaccgatccaaatacggttattgatgtacggaaaggg
cttccacgcttaagggaacaatggattaaagacaggcaggatgttacgcagcttgatcaa
ctgtcttctgcttatgggcaacaacgccttgcagatgataaacttgatgctttgcgtttt
aattataccactaaaccttataaagcccaacctggtgccaatgtatcgcaaatgcattat
gcaaaaaaaggcatcattacggccgaaatggaatacattgccattagggaaaatcagcag
atcgaattgttgaatgcacaattgggcgatcagcacgaggtcatgaaccatcagcatcag
ggtaatagttttggtgccaataccccaaaaggatacatcacgccggaatttgtgcgggat
gaagtggccgccggacgagcggtaatcccttgcaacattaaccaccctgagttggaaccg
atgattatcggccgtaatttcctggtgaaaattaatgccaacattggcaattccgcggtt
acctctaccattgaagaagaagtagaaaaagctgtttgggcctgccgttggggtgcagat
accattatggacctttctacagggaaaaatatccacgaaacccgcgaatggattatccgc
aattcgccagtacccatcggtaccgttccgatttatcaggccctggaaaaagtaaacggc
aaagccgaagacctgacctgggaaatcttccgcgataccttaattgagcaggccgaacaa
ggcgttgattattttaccattcatgccggggtactgcttcgttatgtgcccttaaccgct
aaaagaattactggaattgtttcccgtggcggatcgatcatggccaaatggtgtttggcg
catcacaaggaaaacttcttgtacacgcatttcgaagaaatctgtgagatcatgaaagct
tacgatgtagctttctctttaggtgatggtttaaggccgggctgtattgccgatgccaac
gatgcggcacagttttcggagctcgaaaccttaggggaactcactaaaatagcctggaaa
cacgatgtacagaccattatcgagggacctggccacgtgccgatgcacctgatcaaagcc
aatatggaaaagcaactcgagcattgtggtgaagcgcctttttatacattaggtccttta
accatagatattgcgccaggctacgatcacattacctcggccattggcgctgccatgatt
ggctggtttggaacagcgatgttgtgttatgttacaccaaaagaacatttaggcttgccg
aataaaaaagatgtgaaagatggtgtaattacctataaaattgcagcgcatgccgccgat
ctggccaaaggtcaccccggtgcgcaataccgcgataacgctttgagtaaagcgaggttc
gagtttaggtgggaggatcagtttaatttatcgctcgatccggatacggcaaaagaattc
catgatgagaccttgccggcagaaggcgccaagattgcgcatttctgctcaatgtgcggg
ccaaatttctgttcgatgaaaattacacaggatgtgcgcgagtatgctgcaaaacaaggc
gtagccgcagatgaggctttggccaaaggcatggaggaaaaatctaaagagtttaccgaa
aaaggaagcgaaatttattcttag
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