Pedobacter sp. KBS0701: FFJ24_021210
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Entry
FFJ24_021210 CDS
T06361
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K12243
AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pek03000
]
FFJ24_021210
Transcription factors [BR:
pek03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FFJ24_021210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF627
Motif
Other DBs
NCBI-ProteinID:
QDW27208
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All DBs
Position
5257653..5258642
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AA seq
329 aa
AA seq
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MALNIYDSDDKYYVVGSNFDIAQFNQPLVTERRDKYSFPFGDAEIVQIAFSGIYIVYGDM
VVKQSRLRIKSFDEPDMVELHFALTGGGIMENYLTNKRLDIKANQHNIIYSPDFDGMAEF
DTGGPHKFFEINFERSRFIDLTSESSILLKNFAENIMNSRSVEISSENLPITLAMHSCIK
DIMNCHFTGGLKLLFLQSKCLELLALQAQAFEQAAKKTVNPAIKSAYDKERIYYVREYLL
ANANHPPSLTELAKTAGINEFKLKHGFKEVFKNTVFGYLSDYKLMRAKELLADSSKDIKN
ISDELGYSSVQHFSSAFSKKFGISPGKAR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccttaaacatttacgatagcgatgataaatattatgttgtaggaagtaatttcgac
attgctcaatttaatcaaccactggtaaccgaaaggcgggataaatacagtttccctttt
ggcgatgcagagatcgtacagattgctttttcgggcatttacattgtttacggcgatatg
gtggtgaaacaaagccgcctgcgcattaaatcttttgatgaacctgatatggtagagctc
cactttgcacttactggcggaggcattatggaaaattacctcaccaataaacgcctggat
attaaagcaaaccagcataacattatttatagtcctgattttgacgggatggcagagttt
gatacgggaggtccgcataaattttttgagataaattttgaaaggtcacgttttattgat
ttaaccagcgaaagcagcatcctgttaaagaattttgccgaaaacatcatgaacagccgt
tcggtagaaatttcatcagaaaacctgcccattaccctggccatgcacagctgcattaaa
gatattatgaactgccattttacaggtgggttaaaattattgtttcttcagtctaaatgt
ttggaactgcttgcactacaggcccaagcttttgaacaagcagctaaaaaaaccgtaaat
cctgctattaaatcggcttatgataaagaaaggatctattatgtccgggaatacctgctg
gccaatgccaatcatccgccatctttaaccgaactggccaaaaccgcaggaataaacgaa
tttaagctgaagcatggctttaaagaagtgttcaaaaatactgtttttggttatctgagc
gattataaattaatgcgggctaaagagctcctggccgatagcagcaaagacatcaaaaat
atttcggatgaactgggttattcttcagtacagcatttcagcagcgcatttagcaagaaa
ttcggcataagcccggggaaagcgcggtag
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