Pedobacter sp. KBS0701: FFJ24_023020
Help
Entry
FFJ24_023020 CDS
T06361
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FFJ24_023020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pek01007
]
FFJ24_023020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pek03016
]
FFJ24_023020
Enzymes [BR:
pek01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
FFJ24_023020
Amino acid related enzymes [BR:
pek01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FFJ24_023020
Transfer RNA biogenesis [BR:
pek03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FFJ24_023020
Prokaryotic type
FFJ24_023020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QDW27549
LinkDB
All DBs
Position
5673368..5674759
Genome browser
AA seq
463 aa
AA seq
DB search
MSVIKPSLAKGTRDFTPVEMVKRNFIYDTIKTVFRKYGYAEIQTPSFENLSTLTGKYGDE
GDKLIFKILNSGEFLKDSKKKSFDFAEEDNSNKLIPLISEKALRYDLTVPFARYVVMHQH
EITLPFKRFQVQPVWRADRPQKGRYREFYQCDVDVVGSKSLLNEAEFILIYNEALSKLGL
KDFSIKINNRKILSGIAEIIGKPDLIIDMTVAIDKLDKIGLDGVSKELLERGFTETDLEK
LRPVILLEGTNEEKLASLKEVLAESETGLKGVAEIEQVFEYVESLISYGLPLVAKLELDI
TLARGLNYYTGCIFEVKTNEVAMGSIGGGGRYDDLTGMFGLKDLTGVGVSFGADRIYDVL
EELNLFPASAEVGTKVLISNFDAEAEKYALPIVQQFRNAGISAELYPSSAKLKKQMAYAD
AKNIPYVILIGGDEIASGELTLKDMQSGEQKKLTVLGILELLK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttattaaaccctcattagcaaaaggtacccgcgattttactcctgttgaaatg
gtaaaacgcaactttatttacgataccattaaaacggttttcaggaaatatggttatgct
gaaatccagacgccaagttttgaaaatctttctacccttaccggaaaatatggtgatgaa
ggcgacaaactgatttttaaaattttaaatagcggcgagtttcttaaagattcaaaaaag
aaatcgttcgattttgctgaggaggataatagtaataaactaatccctttaatttctgaa
aaagctttacgttacgatttaacagtgccatttgcacgttatgtagtaatgcaccagcac
gaaattaccttgccttttaaacgtttccaggttcaacccgtttggcgtgccgatcgtccg
caaaaaggcaggtaccgcgaattttaccagtgcgatgtcgatgtagtcggctctaagagt
ttgctgaacgaagctgaatttattttgatctacaatgaagccttaagcaaattgggatta
aaagatttcagcataaaaattaataaccggaaaattttatcgggtattgccgagattatt
ggtaaacctgatttgattatcgacatgactgtggccattgataaactggataaaattggt
ttagatggcgtaagtaaagaattgttggaacgaggttttaccgaaactgatttggaaaaa
ctgcgtccggtaattttattggaaggtaccaacgaagaaaaactggccagcctgaaagaa
gttttagctgaatccgaaaccggtttaaaaggtgttgctgaaattgaacaggtttttgaa
tatgtagaaagtttgatttcctatggcttaccgttggttgccaaattagaactcgatatt
actttggcccgtggcttaaattactatactggctgcattttcgaggttaaaaccaatgaa
gtggcgatgggcagtatcggtggtggtggtcgttatgatgatttaacaggtatgttcggt
ttaaaagatttaacaggtgtaggtgtttcttttggtgccgaccgtatttatgatgtattg
gaagaacttaaccttttccctgcttcagctgaggttggaacaaaagtgttgatcagtaat
tttgatgcggaggctgaaaaatatgctttaccaattgttcagcagtttagaaatgcgggt
atttcagctgaattatacccaagttcggcaaaactgaaaaaacaaatggcctatgcagat
gccaagaatatcccttatgtaatattaatcggtggcgatgaaattgccagcggagaactt
acattaaaagatatgcaaagcggtgagcagaaaaagctaactgttttaggtatactggag
ttgttgaaataa
DBGET
integrated database retrieval system
