Pedobacter sp. KBS0701: FFJ24_023120
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Entry
FFJ24_023120 CDS
T06361
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_023120
Transporters [BR:
pek02000
]
Other transporters
Pores ion channels [TC:
1
]
FFJ24_023120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
EMC7_beta-sandw
SpaA
DUF3869
NOMO_3rd
Motif
Other DBs
NCBI-ProteinID:
QDW27568
LinkDB
All DBs
Position
complement(5693668..5695980)
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AA seq
770 aa
AA seq
DB search
MKKLQLIGLVMLFTLLSSTVFAAVLKDIKGRVIDASTKQTLPGATIFIPDLKVSAVTNND
GEFTLNNLPSKGSYLVEVHYVGYKTATQVVNFASAAGLEFSLQPTAIETKEIVITGSLIS
STSKRNSASSAIVGKDQLLQPSTNLIDALTKIPGVSQITTGPSISKPVIRGLGYNRIVTL
DDGIKQQGQQWGDEHGIEIDQFKSDRIEVLRGAASLIYGSDALGGVINLLEPSSAPEGQI
KGEFISNYSTNNGLTANSLMLNGNENGFVWRARGTYKNAYSFKTPTGYFPNSGFNETDLS
GMVGLNKSWGYTHLNVSSFRNNIGFYEPTLDDNGNFVKEDGSAFTNDDYKNRTLEYPRQD
IRHYKIALNNNFILGNGNLKADFGYQQNQRRELDGPDPALFFDLKTYNADLKYYIHETNG
WQPVFGISVDDGHSQNKGTEFLIPAYNTFGLGAFAYAKKNWENSTFSIGARYDFRKNNGK
QLFDDGEEKFAPFKNKFSNVSGALGFTHQFTDELNFKANAGSAFRAPNPAELGSNGVHEG
TFRYEVGNSALNPERSYQVDAALEYEGKIVSASASIYNNYIHNYIYASTNGEQRVADGTL
YDVYRYGQVNANLYGAEASLTIHPVPFIHFENTFGYVHAQNNTLNRPLSFIPAGTLRNEL
RFEPKLKGTNDAYLSVGINSAFKQTRVDDVFETPTSGYTLLNAGIGATFNLGKQPVKLSV
SANNLLNQKYYDALSRFKPGRFDQENLNLGVYNPGRNITFGLYIPFTVVK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattacagcttatcggcttggtaatgctatttacgttattaagcagcactgtt
ttcgctgccgttttaaaagatataaaaggcagggttattgatgccagcacaaaacaaact
ttaccaggggcaaccatttttattccggatttaaaggtttcggccgtaactaacaatgat
ggagaatttactttaaacaaccttccctcaaaagggagttacctggtagaagtacattac
gtaggctacaaaaccgctacgcaagtggtaaactttgccagcgcagccggtttagaattt
tctttacaacctactgcaatagaaacaaaggaaatcgtaatcacaggaagtttaatcagt
agtaccagcaaacgaaatagtgcttcgtcggcgatagtaggcaaagatcagttattgcag
ccttctaccaatttaatagacgcattaactaaaatccccggagtatcgcagatcactacc
ggaccttctatttccaaaccggtaataagaggtttaggctacaacaggattgtaacttta
gatgacggaattaaacaacagggccagcaatggggcgacgaacatggcatcgaaatcgat
cagtttaaatcagaccgaatcgaagttttacgtggcgcagcatcattaatttatggttcg
gacgcattaggcggtgtaattaacttattagagcctagttcagcaccagaaggacagata
aaaggtgaatttattagtaactactctaccaacaacggacttaccgccaactccttaatg
ttaaacggtaacgaaaacggttttgtttggagagcccgtggaacctataaaaatgcttat
tcttttaaaacgcctacaggttacttcccaaattctggctttaacgaaaccgatttaagt
ggtatggtggggttaaataaaagctggggttatacccacttgaacgtttcaagtttccgc
aacaacattggtttttacgagccaaccttagatgacaacggaaattttgttaaagaagat
ggtagtgcatttaccaacgatgattataaaaaccgtactttagaatatccacgtcaggat
atcaggcattataaaattgcgttgaacaacaattttattttgggtaatggcaatttaaaa
gctgattttggctatcagcagaaccaacgccgagagttagacggaccagacccagcttta
ttcttcgatcttaaaacgtacaatgcagatctgaaatattatatccacgaaaccaatgga
tggcaacccgtttttggtataagtgtagatgatggccatagccaaaataaaggaacagag
tttttaatccctgcttacaatacttttggtttaggcgcttttgcttacgcaaagaaaaac
tgggaaaacagtacatttagtattggtgcccgttacgattttagaaaaaataacggaaag
caactttttgatgatggcgaagaaaaatttgcaccgtttaaaaacaagttttctaatgta
agcggcgcattgggttttacgcatcaatttactgatgaactgaactttaaagccaatgca
ggttcggctttccgtgcgccaaacccggcagagttaggttcgaatggcgtgcatgagggt
acatttagatacgaggtgggtaactctgccttaaaccctgaacgcagttaccaggtagat
gctgctttagaatatgaaggaaaaattgtgagcgcaagtgcaagtatctacaacaactat
atccacaattacatttacgcatctaccaatggcgaacaaagagtagctgatggtacactt
tatgacgtttaccgctacggacaggtaaatgccaatctttatggtgctgaagccagttta
accattcacccggtgccgtttatccatttcgaaaatacttttggatacgttcacgcacag
aacaataccctaaacagaccgctttcatttattcctgccggaacattgagaaatgagttg
cgtttcgagcctaaacttaaaggcacaaatgacgcctatctttctgtagggatcaactcg
gcatttaaacagacccgcgtggatgatgtttttgaaacgccaaccagcggttatacctta
ttaaatgctggaatcggtgctacatttaatttgggcaaacaaccagttaaattatcggtt
tcggctaataacctgttaaaccagaaatattatgatgctttaagcaggtttaaaccaggt
cgttttgatcaggaaaacctgaatttaggcgtttacaaccctggcagaaacatcactttc
ggattgtatatccctttcactgtggttaaataa
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